RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 GZMMP51124 257 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ZNF140P52738 457 aaPredicted RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 SMSP52788 366 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 CRISP1P54107 249 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 FOXA1P55317 472 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 CTBP2P56545 445 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 NRG3P56975 720 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 CD81P60033 236 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 RAB5BP61020 215 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 EIF5AP63241 154 aaKnown RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ACTC1P68032 377 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ACTA1P68133 377 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ABATP80404 500 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 SSBP1Q04837 148 aaKnown RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 CSTF1Q05048 431 aaKnown RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ZNF91Q05481 1191 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 PIGFQ07326 219 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ACSM2AQ08AH3 577 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 C2orf80Q0P641 193 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 SREBF2Q12772 1141 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ILKQ13418 452 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 GAS6Q14393 721 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 GK2Q14410 553 aaPredicted RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 GBX1Q14549 363 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 HMGN3Q15651 99 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 MPPED2Q15777 294 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ZBTB6Q15916 424 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 GRIK4Q16099 956 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 CARTPTQ16568 116 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 NTRK2Q16620 822 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 FAM214AQ32MH5 1076 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 GPR33Q49SQ1 333 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 MINDY4Q4G0A6 757 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 LBHQ53QV2 105 aaPredicted RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 XKR4Q5GH76 650 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 CRB2Q5IJ48 1285 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 TEX30Q5JUR7 227 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 SIRPB2Q5JXA9 342 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 HENMT1Q5T8I9 393 aaKnown RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 LIPJQ5W064 366 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ACSM2BQ68CK6 577 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 TMEM81Q6P7N7 255 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 CNIH2Q6PI25 160 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 DOK6Q6PKX4 331 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 SEZ6L2Q6UXD5 910 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 LBX2Q6XYB7 198 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 LIAT1Q6ZQX7 453 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 Q6ZSR9 355 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 LHFPL2Q6ZUX7 228 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 Q6ZVU0 165 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 USP30Q70CQ3 517 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 USP45Q70EL2 814 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 TRMT1LQ7Z2T5 733 aaKnown RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 MRPL10Q7Z7H8 261 aaKnown RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 TAC4Q86UU9 113 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 FAM124AQ86V42 546 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 TMC8Q8IU68 726 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 APOBEC3FQ8IUX4 373 aaKnown RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 SYT12Q8IV01 421 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 MCATQ8IVS2 390 aaKnown RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ARHGAP12Q8IWW6 846 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 NPAS3Q8IXF0 933 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 CDH26Q8IXH8 852 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 HS3ST5Q8IZT8 346 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 OR6V1Q8N148 313 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 THEM5Q8N1Q8 247 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 SYNPOQ8N3V7 929 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 SPATA6LQ8N4H0 392 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 TOMM5Q8N4H5 51 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 KLHL36Q8N4N3 616 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 FAM26EQ8N5C1 309 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 FAM86B1Q8N7N1 296 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 NANOGP1Q8N7R0 232 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ACVR1CQ8NER5 493 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 OR4C15Q8NGM1 316 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 OR5M3Q8NGP4 307 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 PPTC7Q8NI37 304 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 NEIL3Q8TAT5 605 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 CD200R1Q8TD46 325 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ELP5Q8TE02 316 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 RHBDD1Q8TEB9 315 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 SELENOMQ8WWX9 145 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 HERVK_113Q902F9 699 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 KAT2AQ92830 837 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 YIPF5Q969M3 257 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 UBE2E3Q969T4 207 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 UPRTQ96BW1 309 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ATG4CQ96DT6 458 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 RNFT2Q96EX2 444 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 SCRN2Q96FV2 425 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 TOE1Q96GM8 510 aaKnown RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ZNF764Q96H86 408 aaPredicted RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 CCDC120Q96HB5 630 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ZNF419Q96HQ0 510 aaPredicted RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 ZBED3Q96IU2 234 aaPredicted RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 LCORQ96JN0 433 aaPredicted RBP3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 SENP8Q96LD8 212 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 COQ10AQ96MF6 247 aa3.3□□□□□ -1.88
AC006539.3-201ENST00000454258 SPATA33Q96N06 139 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms