RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 NEIL3Q8TAT5 605 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 SLC16A10Q8TF71 515 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 NEIL2Q969S2 332 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 ABCG5Q9H222 651 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 EGLN3Q9H6Z9 239 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 NUDT15Q9NV35 164 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 CNIH4Q9P003 139 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 PAPPA2Q9BXP8 1791 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 FAM183AA6NL82 134 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 POM121CA8CG34 1229 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 PRKYO43930 277 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 ETV3P41162 512 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 SEC23BQ15437 767 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 FCN2Q15485 313 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 FBXO22Q8NEZ5 403 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 SORCS1Q8WY21 1168 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 MAGEB10Q96LZ2 347 aaPredicted RBP16.46■□□□□ 0.23
TCF3-204ENST00000453954 MAPKAP1Q9BPZ7 522 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 ING4Q9UNL4 249 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 ENPP4Q9Y6X5 453 aa16.46■□□□□ 0.23
TCF3-204ENST00000453954 MKI67P46013 3256 aaKnown RBP16.46■□□□□ 0.23
TCF3-204ENST00000453954 CD79BP40259 229 aa16.46■□□□□ 0.22
TCF3-204ENST00000453954 SRP9P49458 86 aaKnown RBP16.46■□□□□ 0.22
TCF3-204ENST00000453954 TLE2Q04725 743 aa16.46■□□□□ 0.22
TCF3-204ENST00000453954 UNC5DQ6UXZ4 953 aa16.46■□□□□ 0.22
TCF3-204ENST00000453954 TMC8Q8IU68 726 aa16.46■□□□□ 0.22
TCF3-204ENST00000453954 FBLIM1Q8WUP2 373 aa16.46■□□□□ 0.22
TCF3-204ENST00000453954 ASZ1Q8WWH4 475 aa16.46■□□□□ 0.22
TCF3-204ENST00000453954 UPF1Q92900 1129 aaKnown RBP eCLIP16.46■□□□□ 0.222e-7■■■□□ 19.2
TCF3-204ENST00000453954 RIT1Q92963 219 aa16.46■□□□□ 0.22
TCF3-204ENST00000453954 TADA1Q96BN2 335 aa16.46■□□□□ 0.22
TCF3-204ENST00000453954 PRAMEF25A6NGN4 478 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 ARHGEF33A8MVX0 844 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 HYAL3O43820 417 aaPredicted RBP16.45■□□□□ 0.22
TCF3-204ENST00000453954 IDSP22304 550 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 UFD1Q92890 307 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 C12orf66Q96MD2 445 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 ABCG4Q9H172 646 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 A0A0B4J293 547 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 ZNF840PA6NDX5 716 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 ZNF250P15622 560 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 ASMTP46597 345 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 VEZF1Q14119 521 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 SUZ12Q15022 739 aaKnown RBP16.45■□□□□ 0.22
TCF3-204ENST00000453954 SLX4IPQ5VYV7 408 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 DEFB128Q7Z7B8 93 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 ATCAYQ86WG3 371 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 SAMD12Q8N8I0 201 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 RNF31Q96EP0 1072 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 UROC1Q96N76 676 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 RIOK2Q9BVS4 552 aaKnown RBP16.45■□□□□ 0.22
TCF3-204ENST00000453954 GABARAPL3Q9BY60 117 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 A0A0G2JMZ2 1700 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 LRRC37A2A6NM11 1700 aa16.45■□□□□ 0.22
TCF3-204ENST00000453954 TP53P04637 393 aaPredicted RBP16.44■□□□□ 0.22
TCF3-204ENST00000453954 SCG5P05408 212 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 ATP1B2P14415 290 aaPredicted RBP16.44■□□□□ 0.22
TCF3-204ENST00000453954 SLC9A3P48764 834 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 SLC11A1P49279 550 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 HIST2H2AA3Q6FI13 130 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 MED27Q6P2C8 311 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 SLC24A5Q71RS6 500 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 ZNF467Q7Z7K2 595 aaPredicted RBP16.44■□□□□ 0.22
TCF3-204ENST00000453954 KLBQ86Z14 1044 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 IZUMO1Q8IYV9 350 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 TMEM19Q96HH6 336 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 MACROD1Q9BQ69 325 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 ITM2BQ9Y287 266 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 NCKAP1Q9Y2A7 1128 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 ZNF236Q9UL36 1845 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 CHURC1-FNTBB4DL54 471 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 SMAD9O15198 467 aaKnown RBP16.44■□□□□ 0.22
TCF3-204ENST00000453954 OAZ2O95190 189 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 C8orf89P0DMQ9 161 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 PPIBP23284 216 aaKnown RBP16.44■□□□□ 0.22
TCF3-204ENST00000453954 ZNF157P51786 506 aaPredicted RBP16.44■□□□□ 0.22
TCF3-204ENST00000453954 VSX2P58304 361 aaPredicted RBP16.44■□□□□ 0.22
TCF3-204ENST00000453954 ARL9Q6T311 187 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 AP3S1Q92572 193 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 COL26A1Q96A83 441 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 TRMT61BQ9BVS5 477 aaKnown RBP16.44■□□□□ 0.22
TCF3-204ENST00000453954 GULP1Q9UBP9 304 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 CORO2BQ9UQ03 480 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 CACNA1IQ9P0X4 2223 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 PRR23D1E9PI22 279 aaPredicted RBP16.44■□□□□ 0.22
TCF3-204ENST00000453954 ZNF670-ZNF695F2Z2N8 137 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 PLA2G10O15496 165 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 PRR23D2P0DMB1 279 aaPredicted RBP16.44■□□□□ 0.22
TCF3-204ENST00000453954 CD70P32970 193 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 PCGF2P35227 344 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 ARTNQ5T4W7 220 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 SERINC5Q86VE9 423 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.44■□□□□ 0.221e-6■■■■■ 27.4
TCF3-204ENST00000453954 FAM20CQ8IXL6 584 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 CHST14Q8NCH0 376 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 CEP76Q8TAP6 659 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 TM9SF4Q92544 642 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 KLK6Q92876 244 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 MVB12BQ9H7P6 319 aa16.44■□□□□ 0.22
TCF3-204ENST00000453954 ANHXE9PGG2 379 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms