RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 GGTA1PQ4G0N0 100 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 XKRXQ6PP77 449 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 NCCRP1Q6ZVX7 275 aaPredicted RBP11.55□□□□□ -0.56
CPSF4-208ENST00000452047 C9orf40Q8IXQ3 194 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 ST13P4Q8IZP2 240 aaPredicted RBP11.55□□□□□ -0.56
CPSF4-208ENST00000452047 TMEM151AQ8N4L1 468 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 GOLM1Q8NBJ4 401 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 OR2M7Q8NG81 312 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 OR5L2Q8NGL0 311 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 UHMK1Q8TAS1 419 aaKnown RBP11.55□□□□□ -0.56
CPSF4-208ENST00000452047 NUBPLQ8TB37 319 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 PPWD1Q96BP3 646 aaKnown RBP11.55□□□□□ -0.56
CPSF4-208ENST00000452047 FBXL20Q96IG2 436 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 DMRTA2Q96SC8 542 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 LYARQ9NX58 379 aaKnown RBP11.55□□□□□ -0.56
CPSF4-208ENST00000452047 DNAJC13O75165 2243 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 CREBBPQ92793 2442 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 PKDREJQ9NTG1 2253 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 A0A1B0GTH9 108 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 A0A1B0GTL3 188 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 PRRG2O14669 202 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 SMIM24O75264 130 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 GLSO94925 669 aaPredicted RBP11.54□□□□□ -0.56
CPSF4-208ENST00000452047 NADKO95544 446 aaPredicted RBP11.54□□□□□ -0.56
CPSF4-208ENST00000452047 GPR75O95800 540 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 AIFM1O95831 613 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 GBAP04062 536 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 ABHD2P08910 425 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 FAM58BPP0C7Q3 252 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 HTR1EP28566 365 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 PTGS2P35354 604 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 CCNG1P51959 295 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 ZNF630Q2M218 657 aaPredicted RBP11.54□□□□□ -0.56
CPSF4-208ENST00000452047 ZNF750Q32MQ0 723 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 C10orf62Q5T681 223 aaPredicted RBP11.54□□□□□ -0.56
CPSF4-208ENST00000452047 FRG2Q64ET8 278 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 OPN5Q6U736 354 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 CYP20A1Q6UW02 462 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 C3P1Q6ZMU1 363 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 RTL4Q6ZR62 310 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 RPS27LQ71UM5 84 aaKnown RBP11.54□□□□□ -0.56
CPSF4-208ENST00000452047 NUDT13Q86X67 352 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 OR52N2Q8NGI0 321 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 FAM57AQ8TBR7 257 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 PHF10Q8WUB8 498 aaKnown RBP11.54□□□□□ -0.56
CPSF4-208ENST00000452047 UCN3Q969E3 161 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 ATP6V1E2Q96A05 226 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 RBM18Q96H35 190 aaKnown RBP11.54□□□□□ -0.56
CPSF4-208ENST00000452047 ART5Q96L15 291 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 SGCZQ96LD1 299 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 FRG2BQ96QU4 278 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 SERPINI1Q99574 410 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 MRPL57Q9BQC6 102 aaKnown RBP11.54□□□□□ -0.56
CPSF4-208ENST00000452047 PELOQ9BRX2 385 aaKnown RBP11.54□□□□□ -0.56
CPSF4-208ENST00000452047 C1QTNF3Q9BXJ4 246 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 MRPL46Q9H2W6 279 aaKnown RBP11.54□□□□□ -0.56
CPSF4-208ENST00000452047 ZDHHC11Q9H8X9 412 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 SH2D2AQ9NP31 389 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 TEX10Q9NXF1 929 aaPredicted RBP11.54□□□□□ -0.56
CPSF4-208ENST00000452047 NFU1Q9UMS0 254 aa11.54□□□□□ -0.56
CPSF4-208ENST00000452047 EXOC1LA0A1B0GW35 172 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 A0A1W2PS29 197 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 GLOD5A6NK44 160 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 A8MT66 165 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 E9PLN8 166 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 G3V3Y1 287 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 KIF2AO00139 706 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-208ENST00000452047 PPP6CO00743 305 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 DYRK3O43781 588 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 CDC40O60508 579 aaKnown RBP eCLIP11.53□□□□□ -0.56
CPSF4-208ENST00000452047 CLPSP04118 112 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 SNRPAP09012 282 aaKnown RBP11.53□□□□□ -0.56
CPSF4-208ENST00000452047 CCL3P10147 92 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 ARL1P40616 181 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-208ENST00000452047 SMSP52788 366 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 SLC37A1P57057 533 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 HERVK_113P63132 956 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 ERVK-8P63133 956 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 FOXO1Q12778 655 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 ASPHQ12797 758 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 ZNF791Q3KP31 576 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-208ENST00000452047 PIGGQ5H8A4 983 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 LETMD1Q6P1Q0 360 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 ADGRD1Q6QNK2 874 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 LYPD8Q6UX82 237 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 OR4F6Q8NGB9 312 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 DOK4Q8TEW6 326 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 ZNF483Q8TF39 744 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-208ENST00000452047 MTFMTQ96DP5 389 aaKnown RBP11.53□□□□□ -0.56
CPSF4-208ENST00000452047 VKORC1Q9BQB6 163 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 FAM173AQ9BQD7 235 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 ERVK-6Q9BXR3 956 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 TTTY12Q9BZ98 90 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 CHST11Q9NPF2 352 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 SEMA4BQ9NPR2 832 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-208ENST00000452047 ZNF225Q9UK10 706 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 ERVK-19Q9WJR5 959 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 HRH3Q9Y5N1 445 aa11.53□□□□□ -0.56
CPSF4-208ENST00000452047 NCKAP5O14513 1909 aa11.52□□□□□ -0.56
CPSF4-208ENST00000452047 EXPH5Q8NEV8 1989 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms