RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SLC48A1Q6P1K1 146 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 INO80CQ6PI98 192 aaPredicted RBP12.22□□□□□ -0.45
VPS33A-202ENST00000451053 KIRREL2Q6UWL6 708 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 CCDC121Q6ZUS5 278 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 TMEM132CQ8N3T6 1108 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 LIX1Q8N485 282 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 ZSCAN1Q8NBB4 408 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 DNAJB14Q8TBM8 379 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 METTL21AQ8WXB1 218 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 TANKQ92844 425 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 CMTM5Q96DZ9 223 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 CRELD1Q96HD1 420 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 MARK4Q96L34 752 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 CCDC106Q9BWC9 280 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 FAIM2Q9BWQ8 316 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 P4HTMQ9NXG6 502 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 ARMCX1Q9P291 453 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 CES1P1Q9UKY3 287 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 EXO1Q9UQ84 846 aaKnown RBP12.22□□□□□ -0.45
VPS33A-202ENST00000451053 ACACAQ13085 2346 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 LOC102723996A0A087X1L8 192 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 AKAP10O43572 662 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 SLC22A3O75751 556 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 LRATO95237 230 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 G6PDP11413 515 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 COX6A1P12074 109 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 DRD2P14416 443 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 DDX5P17844 614 aaKnown RBP12.21□□□□□ -0.45
VPS33A-202ENST00000451053 RPL3P39023 403 aaKnown RBP12.21□□□□□ -0.45
VPS33A-202ENST00000451053 CLNS1AP54105 237 aaKnown RBP12.21□□□□□ -0.45
VPS33A-202ENST00000451053 DIO3P55073 304 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 CXADRP78310 365 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 IGLV3-21P80748 117 aaPredicted RBP12.21□□□□□ -0.45
VPS33A-202ENST00000451053 VAC14Q08AM6 782 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 C2orf80Q0P641 193 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 STX4Q12846 297 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 PTGR1Q14914 329 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 ST3GAL2Q16842 350 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 PRSS53Q2L4Q9 553 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 SFT2D3Q587I9 215 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 CPEB2Q7Z5Q1 589 aaKnown RBP12.21□□□□□ -0.45
VPS33A-202ENST00000451053 AMER2Q8N7J2 671 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 GLB1L3Q8NCI6 653 aaPredicted RBP12.21□□□□□ -0.45
VPS33A-202ENST00000451053 OR11G2Q8NGC1 345 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 GFM2Q969S9 779 aaKnown RBP12.21□□□□□ -0.45
VPS33A-202ENST00000451053 ALOXE3Q9BYJ1 711 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 DPY30Q9C005 99 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 FBXL4Q9UKA2 621 aa12.21□□□□□ -0.45
VPS33A-202ENST00000451053 FREM2Q5SZK8 3169 aa12.21□□□□□ -0.46
VPS33A-202ENST00000451053 IGHV1-45A0A0A0MS14 117 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 A0A1W2PQ72 361 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 DYTNA2CJ06 578 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 A8MUA0 341 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 CAPN14A8MX76 684 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 PCDH17O14917 1159 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 HNRNPCL1O60812 293 aaKnown RBP12.2□□□□□ -0.46
VPS33A-202ENST00000451053 ATP5HO75947 161 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 GPR75O95800 540 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 DDCP20711 480 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 PRPS1L1P21108 318 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 GPX3P22352 226 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 PIK3R1P27986 724 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 MNAT1P51948 309 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 CLDN8P56748 225 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 OR4D2P58180 307 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 HEPACAMQ14CZ8 416 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 PCOLCEQ15113 449 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 DPY19L1Q2PZI1 675 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 DEFB109BQ30KR1 87 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 ZNF750Q32MQ0 723 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 AGKQ53H12 422 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 ANKRD26P1Q6NSI1 321 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 FAM180BQ6P0A1 224 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 IKBIPQ70UQ0 350 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 OR4K14Q8NGD5 310 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 RP9Q8TA86 221 aaKnown RBP12.2□□□□□ -0.46
VPS33A-202ENST00000451053 TSPEARQ8WU66 669 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 NACC2Q96BF6 587 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 KLHL29Q96CT2 875 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 IP6K3Q96PC2 410 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 WDR77Q9BQA1 342 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-202ENST00000451053 ZNF700Q9H0M5 742 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 PNO1Q9NRX1 252 aaKnown RBP12.2□□□□□ -0.46
VPS33A-202ENST00000451053 C19orf25Q9UFG5 118 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-202ENST00000451053 UTS2RQ9UKP6 389 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 POLHQ9Y253 713 aa12.2□□□□□ -0.46
VPS33A-202ENST00000451053 FAM234BA2RU67 622 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 ARGFXA6NJG6 315 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 PEX12O00623 359 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 ERAL1O75616 437 aaKnown RBP12.19□□□□□ -0.46
VPS33A-202ENST00000451053 SEC24DO94855 1032 aaPredicted RBP12.19□□□□□ -0.46
VPS33A-202ENST00000451053 UBOX5O94941 541 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 IFNA16P05015 189 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 ESRRAP11474 423 aaPredicted RBP12.19□□□□□ -0.46
VPS33A-202ENST00000451053 CALB2P22676 271 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 HPCAL1P37235 193 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 KCNK10P57789 538 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 C21orf58P58505 322 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 DUSP2Q05923 314 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 ACTN3Q08043 901 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms