RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 WASHC1A8K0Z3 465 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 DYRK3O43781 588 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 PRKRAO75569 313 aaKnown RBP17.96■□□□□ 0.47
USP40-207ENST00000450940 OTCP00480 354 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 FAM153BP0C7A2 387 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 NR2F6P10588 404 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 FAM153CQ494X1 144 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 CMPK2Q5EBM0 449 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 PIGGQ5H8A4 983 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 OPN5Q6U736 354 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 MRGPRGQ86SM5 289 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 GOLM1Q8NBJ4 401 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 SGCZQ96LD1 299 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 EPB41L4BQ9H329 900 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 WDR41Q9HAD4 459 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 AHSPQ9NZD4 102 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 TMEM216Q9P0N5 145 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 ENTPD4Q9Y227 616 aa17.96■□□□□ 0.47
USP40-207ENST00000450940 KLF2Q9Y5W3 355 aaPredicted RBP17.96■□□□□ 0.47
USP40-207ENST00000450940 HRKO00198 91 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 PPP6CO00743 305 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 AIFM1O95831 613 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 SLC35E2P0CK97 266 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 AGAP20933 346 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 PTGER1P34995 402 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 ARL1P40616 181 aaPredicted RBP17.95■□□□□ 0.46
USP40-207ENST00000450940 HERVK_113P63132 956 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 ADORA2A-AS1P86434 159 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 HSF1Q00613 529 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 IFT88Q13099 833 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 SLC29A2Q14542 456 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 TTC19Q6DKK2 380 aaPredicted RBP17.95■□□□□ 0.46
USP40-207ENST00000450940 OR52E8Q6IFG1 317 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 LETMD1Q6P1Q0 360 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 XKRXQ6PP77 449 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 RTL4Q6ZR62 310 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 RPS27LQ71UM5 84 aaKnown RBP17.95■□□□□ 0.46
USP40-207ENST00000450940 DOLPP1Q86YN1 238 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 C9orf40Q8IXQ3 194 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 METTL4Q8N3J2 472 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 SLC15A4Q8N697 577 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 EIF1ADQ8N9N8 165 aaKnown RBP17.95■□□□□ 0.46
USP40-207ENST00000450940 ACMSDQ8TDX5 336 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 TRPC4APQ8TEL6 797 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 ERVK-6Q9BXR3 956 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.95■□□□□ 0.46
USP40-207ENST00000450940 SH3BGRL2Q9UJC5 107 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 ZNF225Q9UK10 706 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 MEMO1Q9Y316 297 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 ZNF407Q9C0G0 2248 aa17.95■□□□□ 0.46
USP40-207ENST00000450940 GLOD5A6NK44 160 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 TFECO14948 347 aaPredicted RBP17.94■□□□□ 0.46
USP40-207ENST00000450940 PGRMC2O15173 223 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 GBAP04062 536 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 RHOXF2BP0C7M4 288 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 CNR1P21554 472 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 HSD17B3P37058 310 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 RFC3P40938 356 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 CDH13P55290 713 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 GPR85P60893 370 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 ZNF750Q32MQ0 723 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 ZNF791Q3KP31 576 aaPredicted RBP17.94■□□□□ 0.46
USP40-207ENST00000450940 SP5Q6BEB4 398 aaPredicted RBP17.94■□□□□ 0.46
USP40-207ENST00000450940 RGS9BPQ6ZS82 235 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 PAGE2Q7Z2X7 111 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 OR2M7Q8NG81 312 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 UCN3Q969E3 161 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 RHOXF2Q9BQY4 288 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 ELOVL6Q9H5J4 265 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 BRF2Q9HAW0 419 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 TEX10Q9NXF1 929 aaPredicted RBP17.94■□□□□ 0.46
USP40-207ENST00000450940 TRPS1Q9UHF7 1281 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 DNAJC13O75165 2243 aa17.94■□□□□ 0.46
USP40-207ENST00000450940 IQANK1A0A1B0GTG1 560 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 PINLYPA6NC86 204 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 ADAM10O14672 748 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 HS6ST1O60243 411 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 DLX3O60479 287 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 GLSO94925 669 aaPredicted RBP17.93■□□□□ 0.46
USP40-207ENST00000450940 NADKO95544 446 aaPredicted RBP17.93■□□□□ 0.46
USP40-207ENST00000450940 KLK1P06870 262 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 ESRRAP11474 423 aaPredicted RBP17.93■□□□□ 0.46
USP40-207ENST00000450940 ABOP16442 354 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 TAC1P20366 129 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 SLC37A1P57057 533 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 CLCQ05315 142 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 ASPHQ12797 758 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 UNC50Q53HI1 259 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 ZNF678Q5SXM1 525 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 LYPD8Q6UX82 237 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 MZB1Q8WU39 189 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 PHF10Q8WUB8 498 aaKnown RBP17.93■□□□□ 0.46
USP40-207ENST00000450940 RIT1Q92963 219 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 PHF12Q96QT6 1004 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 MRPL1Q9BYD6 325 aaKnown RBP17.93■□□□□ 0.46
USP40-207ENST00000450940 SH2D2AQ9NP31 389 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 FARSBQ9NSD9 589 aaKnown RBP17.93■□□□□ 0.46
USP40-207ENST00000450940 SNX6Q9UNH7 406 aa17.93■□□□□ 0.46
USP40-207ENST00000450940 OR6C76A6NM76 312 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 E9PLN8 166 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms