RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 SYNDIG1LA6NDD5 238 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 EFCAB8A8MWE9 144 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 KLF4O43474 513 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 TRIM3O75382 744 aaPredicted RBP11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 TNFSF13O75888 250 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 ACTL6AO96019 429 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 CPN1P15169 458 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 CCR8P51685 355 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 TBPL1P62380 186 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 VLDLRP98155 873 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 DEFA6Q01524 100 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 GLE1Q53GS7 698 aaKnown RBP11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 ANKRD34AQ69YU3 496 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 ZNF474Q6S9Z5 364 aaPredicted RBP11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 C22orf34Q6ZV56 151 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 DND1Q8IYX4 353 aaKnown RBP11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 MPP5Q8N3R9 675 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 SLC15A4Q8N697 577 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 OR14A16Q8NHC5 309 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 AKAP1Q92667 903 aaKnown RBP eCLIP11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 PEX13Q92968 403 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 ALKBH8Q96BT7 664 aaKnown RBP11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 LCORQ96JN0 433 aaPredicted RBP11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 UCN2Q96RP3 112 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 KRT12Q99456 494 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 FAM118BQ9BPY3 351 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 PAK5Q9P286 719 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 LIPT1Q9Y234 373 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 CHCHD2Q9Y6H1 151 aaPredicted RBP11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 SVEP1Q4LDE5 3571 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 ALPK2Q86TB3 2170 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 A0A1W2PNV4 684 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 TRBC2A0A5B9 178 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 FAM187AA6NFU0 413 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 FRG2CA6NGY1 282 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 ERI2A8K979 691 aaKnown RBP11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 DYNC1I1O14576 645 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 LRATO95237 230 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 IGHV4-39P01824 125 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 SMIM10L1P0DMW3 83 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 CHMP24386 653 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 SERPINB3P29508 390 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 CDKN1AP38936 164 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 KCNJ5P48544 419 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 NAGLUP54802 743 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 DR1Q01658 176 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 SRYQ05066 204 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 EIPR1Q53HC9 387 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 TBCELQ5QJ74 424 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 HIST2H2BDQ6DRA6 164 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 LYPD8Q6UX82 237 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 GSTA5Q7RTV2 222 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 STRA8Q7Z7C7 330 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 CLNKQ7Z7G1 428 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 OR10G3Q8NGC4 313 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 OR4K1Q8NGD4 311 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 SLC2A12Q8TD20 617 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 C1orf54Q8WWF1 131 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 ATG4AQ8WYN0 398 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 CAVIN3Q969G5 261 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 REPS1Q96D71 796 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 STARD4Q96DR4 205 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 PGM2Q96G03 612 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 SMIM10Q96HG1 83 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 HS6ST2Q96MM7 605 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 GNRHR2Q96P88 292 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 RAB17Q9H0T7 212 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 UBQLN3Q9H347 655 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 C12orf65Q9H3J6 166 aaKnown RBP11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 COPS7AQ9UBW8 275 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 VTI1BQ9UEU0 232 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 ZFP69BQ9UJL9 534 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 CNOT11Q9UKZ1 510 aaKnown RBP11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 MAPRE3Q9UPY8 281 aa11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 MRPS33Q9Y291 106 aaKnown RBP11.43□□□□□ -0.58
AC004540.1-204ENST00000449537 MYOCOSA0A1B0GUC4 107 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 ANKRD33BA6NCL7 494 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 C17orf105B2RV13 164 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 E5RI56 91 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 H0Y3Z8 333 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 AP3B1O00203 1094 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 TCF21O43680 179 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 ESR1P03372 595 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 CRHP06850 196 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 NPPBP16860 134 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 TBXA2RP21731 343 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 CCKARP32238 428 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 GCKP35557 465 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 FDFT1P37268 417 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 BTN3A2P78410 334 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 LOXL1Q08397 574 aaPredicted RBP11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 RUNX2Q13950 521 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 ARMC3Q5W041 872 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 C8orf74Q6P047 294 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 LCTLQ6UWM7 567 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 IL17RELQ6ZVW7 336 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 ADGRE4PQ86SQ3 457 aa11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 SDCCAG8Q86SQ7 713 aaPredicted RBP11.42□□□□□ -0.58
AC004540.1-204ENST00000449537 ZNF595Q8IYB9 648 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms