RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ANKRD9Q96BM1 317 aaPredicted RBP18.12■□□□□ 0.49
RPS28-202ENST00000449223 CLIP3Q96DZ5 547 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 ANKRD27Q96NW4 1050 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 SLC26A1Q9H2B4 701 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 GLIPR2Q9H4G4 154 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 TMEM181Q9P2C4 612 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 ZNF282Q9UDV7 671 aaPredicted RBP18.12■□□□□ 0.49
RPS28-202ENST00000449223 PCDHGB4Q9UN71 923 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 MMACHCQ9Y4U1 282 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 CLDN16Q9Y5I7 305 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 ZNF780BQ9Y6R6 833 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 BMP10O95393 424 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 C6orf47O95873 294 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 NTRK1P04629 796 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 ATP1B1P05026 303 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 CPMP14384 443 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 MANFP55145 182 aaKnown RBP18.11■□□□□ 0.49
RPS28-202ENST00000449223 SPATS1Q496A3 300 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 C1orf189Q5VU69 101 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 FAM180BQ6P0A1 224 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 QSOX2Q6ZRP7 698 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 ZC3H7AQ8IWR0 971 aaKnown RBP18.11■□□□□ 0.49
RPS28-202ENST00000449223 LRRC25Q8N386 305 aaPredicted RBP18.11■□□□□ 0.49
RPS28-202ENST00000449223 ADAMTS14Q8WXS8 1223 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 PMEPA1Q969W9 287 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 COL26A1Q96A83 441 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 FKBP10Q96AY3 582 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 SLC39A3Q9BRY0 314 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 TRPC4Q9UBN4 977 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 SCN2AQ99250 2005 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 PTPRBP23467 1997 aa18.11■□□□□ 0.49
RPS28-202ENST00000449223 SYNDIG1LA6NDD5 238 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 AGRPO00253 132 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 MEN1O00255 615 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 SLITRK5O94991 958 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 ALBP02768 609 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 JMJD7P0C870 316 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 ZNF28P17035 718 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 NOVA1P51513 510 aaKnown RBP18.1■□□□□ 0.49
RPS28-202ENST00000449223 XKP51811 444 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 DUSP2Q05923 314 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 RUNDC3AQ59EK9 446 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 NANOGP8Q6NSW7 305 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 GPR155Q7Z3F1 870 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 TRIML2Q8N7C3 387 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 OR4A15Q8NGL6 344 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 BBS4Q96RK4 519 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 SPRY4Q9C004 299 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 NANOGQ9H9S0 305 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 IL1RL2Q9HB29 575 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 SIRT3Q9NTG7 399 aaPredicted RBP18.1■□□□□ 0.49
RPS28-202ENST00000449223 C14orf105Q9NVL8 296 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 CDV3Q9UKY7 258 aaKnown RBP18.1■□□□□ 0.49
RPS28-202ENST00000449223 VPS4AQ9UN37 437 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 B3GALT1Q9Y5Z6 326 aa18.1■□□□□ 0.49
RPS28-202ENST00000449223 CFAP73A6NFT4 308 aa18.09■□□□□ 0.49
RPS28-202ENST00000449223 LDB3O75112 727 aa18.09■□□□□ 0.49
RPS28-202ENST00000449223 PORP16435 677 aaPredicted RBP18.09■□□□□ 0.49
RPS28-202ENST00000449223 NCBP2P52298 156 aaKnown RBP eCLIP18.09■□□□□ 0.49
RPS28-202ENST00000449223 PLIN5Q00G26 463 aa18.09■□□□□ 0.49
RPS28-202ENST00000449223 GAB1Q13480 694 aa18.09■□□□□ 0.49
RPS28-202ENST00000449223 CAPRIN1Q14444 709 aaKnown RBP18.09■□□□□ 0.49
RPS28-202ENST00000449223 PGM2L1Q6PCE3 622 aa18.09■□□□□ 0.49
RPS28-202ENST00000449223 TMEM64Q6YI46 380 aa18.09■□□□□ 0.49
RPS28-202ENST00000449223 BNC2Q6ZN30 1099 aaPredicted RBP18.09■□□□□ 0.49
RPS28-202ENST00000449223 ZNF551Q7Z340 670 aaPredicted RBP18.09■□□□□ 0.49
RPS28-202ENST00000449223 SLC15A3Q8IY34 581 aa18.09■□□□□ 0.49
RPS28-202ENST00000449223 KIF2BQ8N4N8 673 aa18.09■□□□□ 0.49
RPS28-202ENST00000449223 UTP4Q969X6 686 aaKnown RBP18.09■□□□□ 0.49
RPS28-202ENST00000449223 TMEM125Q96AQ2 219 aa18.09■□□□□ 0.49
RPS28-202ENST00000449223 SH3GL1Q99961 368 aa18.09■□□□□ 0.49
RPS28-202ENST00000449223 ULBP3Q9BZM4 244 aa18.09■□□□□ 0.49
RPS28-202ENST00000449223 PRTFDC1Q9NRG1 225 aa18.09■□□□□ 0.49
RPS28-202ENST00000449223 AP3M1Q9Y2T2 418 aa18.09■□□□□ 0.49
RPS28-202ENST00000449223 PCDHGA8Q9Y5G5 932 aa18.09■□□□□ 0.49
RPS28-202ENST00000449223 IGKV3D-11A0A0A0MRZ8 115 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 A0A1W2PS29 197 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 VSTM2BA6NLU5 285 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 KCNK5O95279 499 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 ANP32DO95626 131 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 CPSF4O95639 269 aaKnown RBP18.08■□□□□ 0.49
RPS28-202ENST00000449223 CYC1P08574 325 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 SLC35E2P0CK97 266 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 EFNA1P20827 205 aaPredicted RBP18.08■□□□□ 0.49
RPS28-202ENST00000449223 PPIBP23284 216 aaKnown RBP18.08■□□□□ 0.49
RPS28-202ENST00000449223 FEN1P39748 380 aaKnown RBP18.08■□□□□ 0.49
RPS28-202ENST00000449223 GTDC1Q4AE62 458 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 PIGGQ5H8A4 983 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 DNAJC14Q6Y2X3 702 aaPredicted RBP18.08■□□□□ 0.49
RPS28-202ENST00000449223 OVCH1Q7RTY7 1134 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 CCDC116Q8IYX3 515 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 ST13P4Q8IZP2 240 aaPredicted RBP18.08■□□□□ 0.49
RPS28-202ENST00000449223 ZNF675Q8TD23 568 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 ZFP90Q8TF47 636 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 MCUR1Q96AQ8 359 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 CDRT15Q96T59 188 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 CPPED1Q9BRF8 314 aaPredicted RBP18.08■□□□□ 0.49
RPS28-202ENST00000449223 RBCK1Q9BYM8 510 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 CXorf36Q9H7Y0 433 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 NTMQ9P121 344 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms