RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 SLC19A2O60779 497 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 CLDN9O95484 217 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 CBX7O95931 251 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 IGLV3-25P01717 112 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 ELK1P19419 428 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 PRPS1L1P21108 318 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 IGFBP6P24592 240 aaPredicted RBP8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 MMP12P39900 470 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 WNT4P56705 351 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 RAB8AP61006 207 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 SRSF11Q05519 484 aaKnown RBP8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 HEPACAMQ14CZ8 416 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 MPPE1Q53F39 396 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 NOTUMQ6P988 496 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 WASH2PQ6VEQ5 465 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 FBXO16Q8IX29 292 aaPredicted RBP8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 NAGSQ8N159 534 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 TEX26Q8N6G2 289 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 LINC01465Q8N7H1 131 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 OR5T2Q8NGG2 359 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 SLC6A18Q96N87 628 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 PIP5K1AQ99755 562 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 SAP130Q9H0E3 1048 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 METTL17Q9H7H0 456 aaPredicted RBP8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 BPIFA1Q9NP55 256 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 DHRS7Q9Y394 339 aa8.98□□□□□ -0.97
SYNPO2-204ENST00000448416 FAM227AF5H4B4 570 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 STK25O00506 426 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 CASC3O15234 703 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 EEF1E1O43324 174 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 GCM2O75603 506 aaPredicted RBP8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 KDM4BO94953 1096 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 RAB36O95755 333 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 TGM6O95932 706 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 IGFBP1P08833 259 aaPredicted RBP8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 HLA-FP30511 346 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 PCGF2P35227 344 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 PBX3P40426 434 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 FAM198BQ6UWH4 519 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 RNF165Q6ZSG1 346 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 NLRC3Q7RTR2 1065 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 MDGA1Q8NFP4 955 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 MS4A3Q96HJ5 214 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 C12orf66Q96MD2 445 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 RNF39Q9H2S5 420 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 ZCCHC4Q9H5U6 513 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 BEX1Q9HBH7 125 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 MED9Q9NWA0 146 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 ACTR10Q9NZ32 417 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 ALPK3Q96L96 1907 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 ABCD4O14678 606 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 PCDH7O60245 1069 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 NMBP08949 121 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 SULT1A3P0DMM9 295 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 SULT1A4P0DMN0 295 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 SLC6A4P31645 630 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 CRATP43155 626 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 HNMTP50135 292 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 IL10RBQ08334 325 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 MTAPQ13126 283 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 TTLL4Q14679 1199 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 RGNQ15493 299 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 ST3GAL2Q16842 350 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 MPEG1Q2M385 716 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 UNC5DQ6UXZ4 953 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 NLGN1Q8N2Q7 840 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 OR52I1Q8NGK6 324 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 SMG7Q92540 1137 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 SMIM14Q96QK8 99 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 DPH7Q9BTV6 452 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 IMP3Q9NV31 184 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 SPATA6Q9NWH7 488 aaPredicted RBP8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 NINQ8N4C6 2090 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 PRAMEF25A6NGN4 478 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 L7N2F9 121 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 CD9P21926 228 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 GIFP27352 417 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 SRP9P49458 86 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 DEFA5Q01523 94 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 ARHGEF7Q14155 803 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 MFSD14CQ5VZR4 134 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 MARCH9Q86YJ5 346 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 UXS1Q8NBZ7 420 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 BVESQ8NE79 360 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 OR8J1Q8NGP2 316 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 SCAMP5Q8TAC9 235 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 NEIL3Q8TAT5 605 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 RPRD1AQ96P16 312 aaPredicted RBP8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 CACNG6Q9BXT2 260 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 CHIAQ9BZP6 476 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 TBC1D17Q9HA65 648 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 CACNG4Q9UBN1 327 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 REV1Q9UBZ9 1251 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 SF3B6Q9Y3B4 125 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 PTCH2Q9Y6C5 1203 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 A0A1B0GVC2 190 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 A6NIN4 97 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 SCN2BO60939 215 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 MMP10P09238 476 aa8.97□□□□□ -0.97
SYNPO2-204ENST00000448416 ZNF865P0CJ78 1059 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms