RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ICKQ9UPZ9 632 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 TSC22D4Q9Y3Q8 395 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 KMOO15229 486 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 CAPN5O15484 640 aaPredicted RBP14.04□□□□□ -0.16
SF1-211ENST00000448404 HSMCR30P0CW71 290 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 ARAFP10398 606 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 GRK5P34947 590 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 GPC1P35052 558 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 IDUAP35475 653 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 VASPP50552 380 aaPredicted RBP14.04□□□□□ -0.16
SF1-211ENST00000448404 ZNF33BQ06732 778 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 GRSF1Q12849 480 aaKnown RBP eCLIP14.04□□□□□ -0.16
SF1-211ENST00000448404 RFX4Q33E94 735 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 ZC3H12BQ5HYM0 836 aaKnown RBP14.04□□□□□ -0.16
SF1-211ENST00000448404 FAM46CQ5VWP2 391 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 APOL4Q9BPW4 351 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 SLC17A9Q9BYT1 436 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 ZNF226Q9NYT6 803 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 GDE1Q9NZC3 331 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 TBC1D29Q9UFV1 150 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 WDFY4Q6ZS81 3184 aa14.04□□□□□ -0.16
SF1-211ENST00000448404 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.03□□□□□ -0.16
SF1-211ENST00000448404 BTN3A3O00478 584 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 RGS10O43665 173 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 RNGTTO60942 597 aaKnown RBP14.03□□□□□ -0.16
SF1-211ENST00000448404 GADD45GO95257 159 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 CCDC159P0C7I6 412 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 KIR2DL1P43626 348 aaPredicted RBP14.03□□□□□ -0.16
SF1-211ENST00000448404 EIF2B2P49770 351 aaKnown RBP14.03□□□□□ -0.16
SF1-211ENST00000448404 TMBIM6P55061 237 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 HYAL1Q12794 435 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 TEAD4Q15561 434 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 ZNF761Q86XN6 746 aaPredicted RBP14.03□□□□□ -0.16
SF1-211ENST00000448404 OR4N5Q8IXE1 308 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 OXR1Q8N573 874 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 IQCF1Q8N6M8 205 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 SETD7Q8WTS6 366 aaKnown RBP14.03□□□□□ -0.16
SF1-211ENST00000448404 GLIPR2Q9H4G4 154 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 ENPP5Q9UJA9 477 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 PMF1-BGLAPU3KQ54 211 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 NUP210Q8TEM1 1887 aaPredicted RBP14.03□□□□□ -0.16
SF1-211ENST00000448404 C5orf58C9J3I9 102 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 AGRPO00253 132 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 SLC28A2O43868 658 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 EGFP01133 1207 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 CCT3P49368 545 aaKnown RBP14.03□□□□□ -0.16
SF1-211ENST00000448404 PCBP3P57721 371 aaKnown RBP14.03□□□□□ -0.16
SF1-211ENST00000448404 OLR1P78380 273 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 KEAP1Q14145 624 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 LASP1Q14847 261 aaKnown RBP14.03□□□□□ -0.16
SF1-211ENST00000448404 LTB4RQ15722 352 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 RTL10Q7L3V2 364 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 P3H2Q8IVL5 708 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 PSD4Q8NDX1 1056 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 CREB3L4Q8TEY5 395 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 PHF10Q8WUB8 498 aaKnown RBP14.03□□□□□ -0.16
SF1-211ENST00000448404 RAB2BQ8WUD1 216 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 EPYCQ99645 322 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 COPS4Q9BT78 406 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 MVB12BQ9H7P6 319 aa14.03□□□□□ -0.16
SF1-211ENST00000448404 LRIT2A6NDA9 550 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 SOBPA7XYQ1 873 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 ISM1B1AKI9 464 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 APOL3O95236 402 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 INHBBP09529 407 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 ITIH1P19827 911 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 ACSL1P33121 698 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 XCR1P46094 333 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 REEP5Q00765 189 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 ID2Q02363 134 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 ITGADQ13349 1161 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 MICAQ29983 383 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 PERM1Q5SV97 790 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 TMEM107Q6UX40 140 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 SLCO6A1Q86UG4 719 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 HOMEZQ8IX15 550 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 SETD9Q8NE22 299 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 KAT2AQ92830 837 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 ALPK1Q96QP1 1244 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 TUBA1CQ9BQE3 449 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 BTBD1Q9H0C5 482 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 OR51I1Q9H343 314 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 NMNAT1Q9HAN9 279 aaPredicted RBP14.02□□□□□ -0.16
SF1-211ENST00000448404 ZBTB20Q9HC78 741 aaPredicted RBP14.02□□□□□ -0.16
SF1-211ENST00000448404 ZCCHC3Q9NUD5 404 aaKnown RBP14.02□□□□□ -0.16
SF1-211ENST00000448404 SCN3BQ9NY72 215 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 PCDHGA2Q9Y5H1 932 aa14.02□□□□□ -0.16
SF1-211ENST00000448404 A0A1W2PR48 441 aa14.02□□□□□ -0.17
SF1-211ENST00000448404 ZNF860A6NHJ4 632 aa14.02□□□□□ -0.17
SF1-211ENST00000448404 CHRM5P08912 532 aaPredicted RBP14.02□□□□□ -0.17
SF1-211ENST00000448404 LAMP2P13473 410 aa14.02□□□□□ -0.17
SF1-211ENST00000448404 UQCRC2P22695 453 aa14.02□□□□□ -0.17
SF1-211ENST00000448404 PPIBP23284 216 aaKnown RBP14.02□□□□□ -0.17
SF1-211ENST00000448404 TTKP33981 857 aa14.02□□□□□ -0.17
SF1-211ENST00000448404 TRIM23P36406 574 aa14.02□□□□□ -0.17
SF1-211ENST00000448404 NCBP2P52298 156 aaKnown RBP eCLIP14.02□□□□□ -0.172e-7■□□□□ 9.3
SF1-211ENST00000448404 ADPRHP54922 357 aa14.02□□□□□ -0.17
SF1-211ENST00000448404 GABARAPL2P60520 117 aa14.02□□□□□ -0.17
SF1-211ENST00000448404 PRDX1Q06830 199 aaKnown RBP14.02□□□□□ -0.17
SF1-211ENST00000448404 HYAL2Q12891 473 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms