RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 C1orf226A1L170 272 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 SERTM1A2A2V5 107 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 DYTNA2CJ06 578 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 TMEM114B3SHH9 223 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 HRKO00198 91 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 SLC28A1O00337 649 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 RGS14O43566 566 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 GUCY1B2O75343 617 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 ERAL1O75616 437 aaKnown RBP11.11□□□□□ -0.63
RFC4-208ENST00000447345 GPR75O95800 540 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 WDPCPO95876 746 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 ANXA4P09525 319 aaPredicted RBP11.11□□□□□ -0.63
RFC4-208ENST00000447345 SERPINB5P36952 375 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 CASRP41180 1078 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 MLLT10P55197 1068 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 WDR4P57081 412 aaKnown RBP11.11□□□□□ -0.63
RFC4-208ENST00000447345 ABCE1P61221 599 aaKnown RBP11.11□□□□□ -0.63
RFC4-208ENST00000447345 RPL38P63173 70 aaKnown RBP11.11□□□□□ -0.63
RFC4-208ENST00000447345 IGLV3-21P80748 117 aaPredicted RBP11.11□□□□□ -0.63
RFC4-208ENST00000447345 TERF2Q15554 542 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 TTMPQ5BVD1 217 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 ACER2Q5QJU3 275 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 AGBL2Q5U5Z8 902 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 SLC48A1Q6P1K1 146 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 IGFL3Q6UXB1 125 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 TRIM46Q7Z4K8 759 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 HPS6Q86YV9 775 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 CLYBLQ8N0X4 340 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 GOLGA6L1Q8N7Z2 621 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 ZNF781Q8N8C0 355 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 Q8NA96 180 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 APCDD1LQ8NCL9 501 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 CATSPER1Q8NEC5 780 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 OR6Y1Q8NGX8 325 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 DNAJB14Q8TBM8 379 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 SLC2A12Q8TD20 617 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 C16orf78Q8WTQ4 265 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 PTPMT1Q8WUK0 201 aaPredicted RBP11.11□□□□□ -0.63
RFC4-208ENST00000447345 DAZLQ92904 295 aaKnown RBP11.11□□□□□ -0.63
RFC4-208ENST00000447345 KLHL29Q96CT2 875 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 PPP1R36Q96LQ0 422 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 FAIM2Q9BWQ8 316 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 DEFB126Q9BYW3 111 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.11□□□□□ -0.63
RFC4-208ENST00000447345 CDCP1Q9H5V8 836 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 LIN28AQ9H9Z2 209 aaKnown RBP11.11□□□□□ -0.63
RFC4-208ENST00000447345 LRTM1Q9HBL6 345 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 SLAMF7Q9NQ25 335 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 PFDN4Q9NQP4 134 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 NKIRAS1Q9NYS0 192 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 HEY2Q9UBP5 337 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 GIMAP2Q9UG22 337 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 ZDHHC2Q9UIJ5 367 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 B3GNT3Q9Y2A9 372 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 DLGAP4Q9Y2H0 992 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 PCDHA9Q9Y5H5 950 aa11.11□□□□□ -0.63
RFC4-208ENST00000447345 GCN1Q92616 2671 aaKnown RBP11.11□□□□□ -0.63
RFC4-208ENST00000447345 ATP6AP2A0A1C7CYW4 349 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 SYNDIG1LA6NDD5 238 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 TTLL8A6PVC2 850 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 GABRR3A8MPY1 467 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 PRKNO60260 465 aaPredicted RBP11.1□□□□□ -0.63
RFC4-208ENST00000447345 SEC22BO75396 215 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 ATP6AP2O75787 350 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 SORBS2O94875 1100 aaKnown RBP11.1□□□□□ -0.63
RFC4-208ENST00000447345 DDAH2O95865 285 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 NT5EP21589 574 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 FEN1P39748 380 aaKnown RBP11.1□□□□□ -0.63
RFC4-208ENST00000447345 SLC1A6P48664 564 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 TRA2BP62995 288 aaKnown RBP11.1□□□□□ -0.63
RFC4-208ENST00000447345 ERVK-8P63133 956 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 TLE1Q04724 770 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 ZNF763Q0D2J5 394 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 BST1Q10588 318 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 PDCD2Q16342 344 aaPredicted RBP11.1□□□□□ -0.63
RFC4-208ENST00000447345 MEP1AQ16819 746 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 PLEKHN1Q494U1 663 aaPredicted RBP11.1□□□□□ -0.63
RFC4-208ENST00000447345 NOXRED1Q6NXP6 359 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 H3F3CQ6NXT2 135 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 IGFL2Q6UWQ7 119 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 C16orf47Q6ZP98 133 aaPredicted RBP11.1□□□□□ -0.63
RFC4-208ENST00000447345 RPS19BP1Q86WX3 136 aaKnown RBP11.1□□□□□ -0.63
RFC4-208ENST00000447345 ST13P4Q8IZP2 240 aaPredicted RBP11.1□□□□□ -0.63
RFC4-208ENST00000447345 MORN4Q8NDC4 146 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 OR4K14Q8NGD5 310 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 RIT1Q92963 219 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 PNPLA2Q96AD5 504 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 EXOSC8Q96B26 276 aaKnown RBP11.1□□□□□ -0.63
RFC4-208ENST00000447345 RBM18Q96H35 190 aaKnown RBP11.1□□□□□ -0.63
RFC4-208ENST00000447345 ATP6V1G3Q96LB4 118 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 ZNF354BQ96LW1 612 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 LMF1Q96S06 567 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 C20orf27Q9GZN8 174 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 C1orf109Q9NX04 203 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 STMN3Q9NZ72 180 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 ABI3Q9P2A4 366 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 COPS7AQ9UBW8 275 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 ERVK-19Q9WJR5 959 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 CCL27Q9Y4X3 112 aa11.1□□□□□ -0.63
RFC4-208ENST00000447345 NBASA2RRP1 2371 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms