RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	HSDL2	Q6YN16	418 aa		6.5	□□□□□ -1.37
TRIM6-205	ENST00000445329	CPNE8	Q86YQ8	564 aa		6.5	□□□□□ -1.37
TRIM6-205	ENST00000445329	PUSL1	Q8N0Z8	303 aa	Known RBP	6.5	□□□□□ -1.37
TRIM6-205	ENST00000445329	GMCL1P1	Q8NEA9	526 aa		6.5	□□□□□ -1.37
TRIM6-205	ENST00000445329	FBXO22	Q8NEZ5	403 aa		6.5	□□□□□ -1.37
TRIM6-205	ENST00000445329	AP3S1	Q92572	193 aa		6.5	□□□□□ -1.37
TRIM6-205	ENST00000445329	ZNF516	Q92618	1163 aa		6.5	□□□□□ -1.37
TRIM6-205	ENST00000445329	HMCES	Q96FZ2	354 aa		6.5	□□□□□ -1.37
TRIM6-205	ENST00000445329	NUDT11	Q96G61	164 aa		6.5	□□□□□ -1.37
TRIM6-205	ENST00000445329	TGM7	Q96PF1	710 aa		6.5	□□□□□ -1.37
TRIM6-205	ENST00000445329	MED28	Q9H204	178 aa		6.5	□□□□□ -1.37
TRIM6-205	ENST00000445329	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	6.5	□□□□□ -1.37
TRIM6-205	ENST00000445329	GLYATL1P3	A0A0U1RQE8	302 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	ORC5	O43913	435 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	CYTIP	O60759	359 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	NDUFS3	O75489	264 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	SPDEF	O95238	335 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	OR8U8	P0C7N1	319 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	SLC35G4	P0C7Q5	338 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	HIST1H1B	P16401	226 aa	Known RBP	6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	ENG	P17813	658 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	CD200	P41217	278 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	BLOC1S1	P78537	153 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	SP3	Q02447	781 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	GAMT	Q14353	236 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	GPR176	Q14439	515 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	LASP1	Q14847	261 aa	Known RBP	6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	TRIP4	Q15650	581 aa	Predicted RBP	6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	FAM187B	Q17R55	369 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	C14orf28	Q4W4Y0	310 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	SYT6	Q5T7P8	510 aa	Predicted RBP	6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	ALKAL2	Q6UX46	152 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	OTOP2	Q7RTS6	562 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	SKA3	Q8IX90	412 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	SYNPO	Q8N3V7	929 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	ADPRHL1	Q8NDY3	354 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	HAS1	Q92839	578 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	WNT8B	Q93098	351 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	SLC45A3	Q96JT2	553 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	FEM1A	Q9BSK4	669 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	GLIS2	Q9BZE0	524 aa	Predicted RBP	6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	MFF	Q9GZY8	342 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	RNF167	Q9H6Y7	350 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	SLC28A3	Q9HAS3	691 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	CTPS2	Q9NRF8	586 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	FAM217B	Q9NTX9	383 aa	Predicted RBP	6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	PUS1	Q9Y606	427 aa	Known RBP eCLIP	6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	PRAMEF33	A0A0G2JMD5	474 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	PRORSD1P	A6NEY8	169 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	OR2W5	A6NFC9	320 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	DVL2	O14641	736 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	PRAMEF10	O60809	474 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	CA11	O75493	328 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	FGF19	O95750	216 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	PF4V1	P10720	104 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	ANXA3	P12429	323 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	NME1	P15531	152 aa	Known RBP	6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	NNMT	P40261	264 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	CD47	Q08722	323 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	SOWAHA	Q2M3V2	549 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	TMEM67	Q5HYA8	995 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	HACD4	Q5VWC8	232 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	SAXO2	Q658L1	398 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	DNAJC24	Q6P3W2	148 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	SH2D5	Q6ZV89	423 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	ZNF654	Q8IZM8	581 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	ZNF687	Q8N1G0	1237 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	STK40	Q8N2I9	435 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	ZNF655	Q8N720	491 aa	Predicted RBP	6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	LARP4B	Q92615	738 aa	Known RBP	6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	ERMAP	Q96PL5	475 aa	Predicted RBP	6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	ADAM2	Q99965	735 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	ELOVL4	Q9GZR5	314 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	EPHX3	Q9H6B9	360 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	BRF2	Q9HAW0	419 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	LTB4R2	Q9NPC1	389 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	RBAK	Q9NYW8	714 aa	Predicted RBP	6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	PTTG3P	Q9NZH4	202 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	NLK	Q9UBE8	527 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	FEM1B	Q9UK73	627 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	ATAD5	Q96QE3	1844 aa		6.49	□□□□□ -1.37
TRIM6-205	ENST00000445329	IGKV6D-41	A0A0C4DH26	115 aa		6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	FAM240B	A0A1B0GVZ2	78 aa		6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	LRRC14B	A6NHZ5	514 aa		6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	GPR25	O00155	361 aa		6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	SURF4	O15260	269 aa		6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	MBTPS2	O43462	519 aa		6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	LZTS3	O60299	673 aa	Predicted RBP	6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	TSPAN3	O60637	253 aa		6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	ADH1A	P07327	375 aa		6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	AKR1A1	P14550	325 aa		6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	ZNF14	P17017	642 aa	Predicted RBP	6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	POU3F2	P20265	443 aa	Predicted RBP	6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	TBXA2R	P21731	343 aa		6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	GADD45A	P24522	165 aa		6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	DNASE1	P24855	282 aa		6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	CEACAM8	P31997	349 aa	Predicted RBP	6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	MAP2K3	P46734	347 aa		6.48	□□□□□ -1.37
TRIM6-205	ENST00000445329	SUCLG1	P53597	346 aa	Known RBP	6.48	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms