RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 MLIPQ5VWP3 458 aa14.18□□□□□ -0.14
CCNE1-203ENST00000444983 SNX32Q86XE0 403 aa14.18□□□□□ -0.14
CCNE1-203ENST00000444983 POU5F2Q8N7G0 328 aa14.18□□□□□ -0.14
CCNE1-203ENST00000444983 NKD1Q969G9 470 aa14.18□□□□□ -0.14
CCNE1-203ENST00000444983 MIEF2Q96C03 454 aa14.18□□□□□ -0.14
CCNE1-203ENST00000444983 CMTM5Q96DZ9 223 aa14.18□□□□□ -0.14
CCNE1-203ENST00000444983 NECTIN3Q9NQS3 549 aa14.18□□□□□ -0.14
CCNE1-203ENST00000444983 THSD1Q9NS62 852 aa14.18□□□□□ -0.14
CCNE1-203ENST00000444983 ACSS1Q9NUB1 689 aaPredicted RBP14.18□□□□□ -0.14
CCNE1-203ENST00000444983 NXT1Q9UKK6 140 aaKnown RBP14.18□□□□□ -0.14
CCNE1-203ENST00000444983 MAN2B2Q9Y2E5 1009 aa14.18□□□□□ -0.14
CCNE1-203ENST00000444983 FREM2Q5SZK8 3169 aa14.18□□□□□ -0.14
CCNE1-203ENST00000444983 NUP214P35658 2090 aaPredicted RBP14.18□□□□□ -0.14
CCNE1-203ENST00000444983 TCRBV16S1A1N1A0A5B0 115 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 CFLARO15519 480 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 RAD1O60671 282 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 ERAL1O75616 437 aaKnown RBP14.17□□□□□ -0.14
CCNE1-203ENST00000444983 ATP1B1P05026 303 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 CYC1P08574 325 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 CPMP14384 443 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 DDX5P17844 614 aaKnown RBP14.17□□□□□ -0.14
CCNE1-203ENST00000444983 TCN2P20062 427 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 SPINK2P20155 84 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 PTPN6P29350 595 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 SOX18P35713 384 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 SLC13A2Q13183 592 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 BIKQ13323 160 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 PAGE3Q5JUK9 113 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 ANXA8L1Q5VT79 327 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 SAMD14Q8IZD0 417 aaPredicted RBP14.17□□□□□ -0.14
CCNE1-203ENST00000444983 DPP10Q8N608 796 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 GOT1L1Q8NHS2 421 aaPredicted RBP14.17□□□□□ -0.14
CCNE1-203ENST00000444983 PSMA8Q8TAA3 256 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 CT55Q8WUE5 264 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 GTF2H4Q92759 462 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 NXPE2Q96DL1 559 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 CCDC115Q96NT0 180 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 AMDHD1Q96NU7 426 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 TRIM4Q9C037 500 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 GLIPR2Q9H4G4 154 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 MAP10Q9P2G4 905 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 BTNL2Q9UIR0 455 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 MKL2Q9ULH7 1088 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 NDUFAF1Q9Y375 327 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 MSRB2Q9Y3D2 182 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 ZNF780BQ9Y6R6 833 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 IDSB3KWA1 339 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 C9J4A7 227 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 PDPK1O15530 556 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 UBOX5O94941 541 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 CBX6O95503 412 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 CD63P08962 238 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 SLC35E2P0CK97 266 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 C8orf89P0DMQ9 161 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 ATXN8OSP0DMR3 200 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 CSNK2A2P19784 350 aaPredicted RBP14.17□□□□□ -0.14
CCNE1-203ENST00000444983 FEN1P39748 380 aaKnown RBP14.17□□□□□ -0.14
CCNE1-203ENST00000444983 ID2Q02363 134 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 LRRC74AQ0VAA2 488 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 STX5Q13190 355 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 MAPKAPK3Q16644 382 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 MINDY4Q4G0A6 757 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 ENDOVQ8N8Q3 282 aaKnown RBP14.17□□□□□ -0.14
CCNE1-203ENST00000444983 OR2Y1Q8NGV0 311 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 ZNF578Q96N58 590 aaPredicted RBP14.17□□□□□ -0.14
CCNE1-203ENST00000444983 PTCHD1Q96NR3 888 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 ALOXE3Q9BYJ1 711 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 SOX17Q9H6I2 414 aaPredicted RBP14.17□□□□□ -0.14
CCNE1-203ENST00000444983 SLAMF8Q9P0V8 285 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 TAGLN3Q9UI15 199 aa14.17□□□□□ -0.14
CCNE1-203ENST00000444983 A0A1W2PRB8 838 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 BBIP1A8MTZ0 92 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 C21orf140B9A014 251 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 UMODP07911 640 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 PORP16435 677 aaPredicted RBP14.16□□□□□ -0.14
CCNE1-203ENST00000444983 HOXB9P17482 250 aaPredicted RBP14.16□□□□□ -0.14
CCNE1-203ENST00000444983 F8A1P23610 371 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 MPIP34949 423 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 HBA1P69905 142 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 SLC2A7Q6PXP3 512 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 TMEM205Q6UW68 189 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 DLEU7Q6UYE1 221 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 SHISA6Q6ZSJ9 500 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 ANKRD46Q86W74 232 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 CCDC116Q8IYX3 515 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 ST13P4Q8IZP2 240 aaPredicted RBP14.16□□□□□ -0.14
CCNE1-203ENST00000444983 CLECL1Q8IZS7 167 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 LRRC25Q8N386 305 aaPredicted RBP14.16□□□□□ -0.14
CCNE1-203ENST00000444983 C7orf57Q8NEG2 295 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 VPS37AQ8NEZ2 397 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 TSLPQ969D9 159 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 ZBED6CLQ96FA7 236 aaPredicted RBP14.16□□□□□ -0.14
CCNE1-203ENST00000444983 NSL1Q96IY1 281 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 GPR87Q9BY21 358 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 GPN3Q9UHW5 284 aaPredicted RBP14.16□□□□□ -0.14
CCNE1-203ENST00000444983 LEF1Q9UJU2 399 aaPredicted RBP14.16□□□□□ -0.14
CCNE1-203ENST00000444983 PCDHGA6Q9Y5G7 932 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 AK5Q9Y6K8 562 aa14.16□□□□□ -0.14
CCNE1-203ENST00000444983 LOC101059948A0A1B0GTJ6 334 aa14.15□□□□□ -0.14
CCNE1-203ENST00000444983 EBAG9O00559 213 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms