RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 PDZK1P1A8MUH7 402 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 B2RBV5 119 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 TMEM114B3SHH9 223 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 TMEM233B4DJY2 109 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 OR7A17O14581 309 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ZNF195O14628 629 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 CCNT2O60583 730 aaKnown RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 KCNJ13O60928 360 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 SUPT7LO94864 414 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 SLC16A8O95907 504 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 IFNA2P01563 188 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 C9P02748 559 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 CATP04040 527 aaKnown RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 JUNP05412 331 aaKnown RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 VIMP08670 466 aaKnown RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ANXA5P08758 320 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ENO2P09104 434 aaPredicted RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 SLC35G4P0C7Q5 338 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 KITP10721 976 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ERGP11308 486 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 MTHFD1P11586 935 aaKnown RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 NEFHP12036 1026 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 CYP2A7P20853 494 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 IDSP22304 550 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 GRK2P25098 689 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 PKLRP30613 574 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 GGT5P36269 586 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 FOXA1P55317 472 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 AP1S2P56377 157 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 SOX8P57073 446 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 RPL11P62913 178 aaKnown RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 UBE2IP63279 158 aaKnown RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ADORA2A-AS1P86434 159 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 HHEXQ03014 270 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 TRAF3Q13114 568 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 PRKG2Q13237 762 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ATP1A4Q13733 1029 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ICAM4Q14773 271 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 TERF2Q15554 542 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 FXNQ16595 210 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 PTCHD3Q3KNS1 767 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 CDKL4Q5MAI5 379 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ATG16L1Q676U5 607 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 FAM199XQ6PEV8 388 aaPredicted RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 PODNL1Q6PEZ8 512 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 AGTRAPQ6RW13 159 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 UNC5DQ6UXZ4 953 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 WASH2PQ6VEQ5 465 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ETV3LQ6ZN32 361 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 SLC22A9Q8IVM8 553 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 DCUN1D3Q8IWE4 304 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 TBC1D21Q8IYX1 336 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 SFRP1Q8N474 314 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 LINC01555Q8NAE3 123 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 AVL9Q8NBF6 648 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 SIMC1Q8NDZ2 872 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 OR52B6Q8NGF0 335 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 OR9A1PQ8NGU1 263 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 OR56A3Q8NH54 315 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 OR5K2Q8NHB8 316 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 RFWD2Q8NHY2 731 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 PPP1R14CQ8TAE6 165 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 DNAJB14Q8TBM8 379 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 MCOLN3Q8TDD5 553 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 AGAP11Q8TF27 550 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ZNF473Q8WTR7 871 aaKnown RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 CA5BP1Q8WTZ4 195 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ZNF480Q8WV37 535 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 C10orf82Q8WW14 230 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 NR4A3Q92570 626 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 NRGNQ92686 78 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 DVL3Q92997 716 aaPredicted RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 MR1Q95460 341 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 PYCR2Q96C36 320 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 CCDC126Q96EE4 140 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 CNDP1Q96KN2 507 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 CCDC140Q96MF4 163 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 OR4K3Q96R72 315 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 CCT8L2Q96SF2 557 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 EGFL8Q99944 293 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ELAC2Q9BQ52 826 aaKnown RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 HGH1Q9BTY7 390 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 NLNQ9BYT8 704 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 CD244Q9BZW8 370 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 XKR8Q9H6D3 395 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 KCNK13Q9HB14 408 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 SEMA4BQ9NPR2 832 aaPredicted RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 WASH6PQ9NQA3 447 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 IMP3Q9NV31 184 aaKnown RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 THAP1Q9NVV9 213 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ARL15Q9NXU5 204 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 WWOXQ9NZC7 414 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 MARCOQ9UEW3 520 aaPredicted RBP4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ZDHHC2Q9UIJ5 367 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 RARRES3Q9UL19 164 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ACSL5Q9ULC5 683 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 ICKQ9UPZ9 632 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 SH2B3Q9UQQ2 575 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms