RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 OR4K2Q8NGD2 314 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 OR13C4Q8NGS5 318 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 RHEBL1Q8TAI7 183 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 STAG3L4Q8TBR4 150 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC26A7Q8TE54 656 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 RAB40AQ8WXH6 277 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 PHF21BQ96EK2 531 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 L3HYPDHQ96EM0 354 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 TMA16Q96EY4 203 aaKnown RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 IGSF21Q96ID5 467 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 DNAJC1Q96KC8 554 aaKnown RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF558Q96NG5 402 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 CATSPER2Q96P56 530 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 CDRT15Q96T59 188 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 YME1L1Q96TA2 773 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 MGME1Q9BQP7 344 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 TDRD1Q9BXT4 1180 aaKnown RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 MRPL1Q9BYD6 325 aaKnown RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 VCX3BQ9H321 246 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 HIPK3Q9H422 1215 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 CXorf56Q9H5V9 222 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 ALG9Q9H6U8 611 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 SUDS3Q9H7L9 328 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 MEAF6Q9HAF1 191 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 SCPEP1Q9HB40 452 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 KRCC1Q9NPI7 259 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 MRPL40Q9NQ50 206 aaKnown RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 GKN1Q9NS71 199 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 INTS10Q9NVR2 710 aaKnown RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 UTP6Q9NYH9 597 aaKnown RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 HACD3Q9P035 362 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 KLQ9UEF7 1012 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 STK39Q9UEW8 545 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 CDH22Q9UJ99 828 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 STOML2Q9UJZ1 356 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 UTS2RQ9UKP6 389 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 AGO1Q9UL18 857 aaKnown RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 TMCO1Q9UM00 188 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 POMPQ9Y244 141 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 FIS1Q9Y3D6 152 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 RAI2Q9Y5P3 530 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 ARL5AQ9Y689 179 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 KCNE2Q9Y6J6 123 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 TRIP12Q14669 1992 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 NLRC5Q86WI3 1866 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 A0A1B0GVM2 712 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 A0A1W2PQF6 199 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 TYW5A2RUC4 315 aaKnown RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 MAGEA13PA6NCF6 341 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 SYCE1LA8MT33 242 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ANKRD66B4E2M5 251 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 H0Y626 953 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 PSMD12O00232 456 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 UBFD1O14562 309 aaKnown RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 PRRG1O14668 218 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 STX7O15400 261 aaKnown RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 TBL1XO60907 577 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 VPS26AO75436 327 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ECI2O75521 394 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 PDE5AO76074 875 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 SORBS2O94875 1100 aaKnown RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 OR2C1O95371 312 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 SPARCP09486 303 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 IRF1P10914 325 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ENO3P13929 434 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 GFAPP14136 432 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 COX7A2P14406 83 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 PKMP14618 531 aaKnown RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 CD1EP15812 388 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 CDH2P19022 906 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 CD9P21926 228 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 KCNA5P22460 613 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ME2P23368 584 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 SP100P23497 879 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 NFKBIAP25963 317 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 CDC25CP30307 473 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 RFC2P35250 354 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 DPP6P42658 865 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 RGRP47804 291 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 RFX2P48378 723 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 TTPAP49638 278 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ACADVLP49748 655 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ATP4BP51164 291 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 SGSHP51688 502 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 CLCN4P51793 760 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF140P52738 457 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 STC1P52823 247 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 PLK1P53350 603 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 C1QTNF8P60827 252 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 STX1BP61266 288 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 PSME3P61289 254 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 RHOAP61586 193 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 HERVK_113P63132 956 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 IRX1P78414 480 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 EFNB1P98172 346 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 KLC1Q07866 573 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 TWF1Q12792 350 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 TMEM115Q12893 351 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 TRAP1Q12931 704 aaKnown RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 TRAF2Q12933 501 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms