RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 LIPMQ5VYY2 423 aa21.99■■□□□ 1.11
VARS-217ENST00000440048 OR52E8Q6IFG1 317 aa21.99■■□□□ 1.11
VARS-217ENST00000440048 HSDL2Q6YN16 418 aa21.99■■□□□ 1.11
VARS-217ENST00000440048 C10orf107Q8IVU9 208 aa21.99■■□□□ 1.11
VARS-217ENST00000440048 ST13P4Q8IZP2 240 aaPredicted RBP21.99■■□□□ 1.11
VARS-217ENST00000440048 C1orf52Q8N6N3 182 aaKnown RBP21.99■■□□□ 1.11
VARS-217ENST00000440048 HORMAD2Q8N7B1 307 aa21.99■■□□□ 1.11
VARS-217ENST00000440048 SCMH1Q96GD3 660 aa21.99■■□□□ 1.11
VARS-217ENST00000440048 HES7Q9BYE0 225 aa21.99■■□□□ 1.11
VARS-217ENST00000440048 ACPTQ9BZG2 426 aa21.99■■□□□ 1.11
VARS-217ENST00000440048 KLHL1Q9NR64 748 aa21.99■■□□□ 1.11
VARS-217ENST00000440048 POLEQ07864 2286 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 CCDC151A5D8V7 595 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 TMEM200CA6NKL6 621 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 SPAG7O75391 227 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 ITGA10O75578 1167 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 RASAL1O95294 804 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 CD46P15529 392 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 CYB561P49447 251 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 HLCSP50747 726 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 FOXA1P55317 472 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 PCLAFQ15004 111 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 ZNF324BQ6AW86 544 aaPredicted RBP21.98■■□□□ 1.11
VARS-217ENST00000440048 SCIMPQ6UWF3 145 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 C16orf47Q6ZP98 133 aaPredicted RBP21.98■■□□□ 1.11
VARS-217ENST00000440048 ZNF227Q86WZ6 799 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 GBP7Q8N8V2 638 aaPredicted RBP21.98■■□□□ 1.11
VARS-217ENST00000440048 ZNF721Q8TF20 911 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 CHTF18Q8WVB6 975 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 SREK1Q8WXA9 508 aaKnown RBP21.98■■□□□ 1.11
VARS-217ENST00000440048 SENP5Q96HI0 755 aaPredicted RBP21.98■■□□□ 1.11
VARS-217ENST00000440048 C5orf34Q96MH7 638 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 PELOQ9BRX2 385 aaKnown RBP21.98■■□□□ 1.11
VARS-217ENST00000440048 TRIM45Q9H8W5 580 aaPredicted RBP21.98■■□□□ 1.11
VARS-217ENST00000440048 LIN28AQ9H9Z2 209 aaKnown RBP21.98■■□□□ 1.11
VARS-217ENST00000440048 OLAHQ9NV23 265 aa21.98■■□□□ 1.11
VARS-217ENST00000440048 ANKUB1A6NFN9 424 aa21.97■■□□□ 1.11
VARS-217ENST00000440048 H3BQF6 201 aa21.97■■□□□ 1.11
VARS-217ENST00000440048 TUBBP07437 444 aa21.97■■□□□ 1.11
VARS-217ENST00000440048 SP1P08047 785 aa21.97■■□□□ 1.11
VARS-217ENST00000440048 HMGCS1Q01581 520 aa21.97■■□□□ 1.11
VARS-217ENST00000440048 EIF2S3LQ2VIR3 472 aaKnown RBP21.97■■□□□ 1.11
VARS-217ENST00000440048 ST6GALNAC3Q8NDV1 305 aa21.97■■□□□ 1.11
VARS-217ENST00000440048 DOK4Q8TEW6 326 aa21.97■■□□□ 1.11
VARS-217ENST00000440048 TM4SF18Q96CE8 201 aa21.97■■□□□ 1.11
VARS-217ENST00000440048 FAM111AQ96PZ2 611 aa21.97■■□□□ 1.11
VARS-217ENST00000440048 SLX1AQ9BQ83 275 aa21.97■■□□□ 1.11
VARS-217ENST00000440048 TNFRSF12AQ9NP84 129 aa21.97■■□□□ 1.11
VARS-217ENST00000440048 SLC17A7Q9P2U7 560 aa21.97■■□□□ 1.11
VARS-217ENST00000440048 COPS7AQ9UBW8 275 aa21.97■■□□□ 1.11
VARS-217ENST00000440048 YARS2Q9Y2Z4 477 aaKnown RBP21.97■■□□□ 1.11
VARS-217ENST00000440048 A0A1W2PS29 197 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 SERTM1A2A2V5 107 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 HRKO00198 91 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 DYRK3O43781 588 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 OR10H2O60403 315 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 GUCY1B2O75343 617 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 EDN3P14138 238 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 CREB1P16220 341 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 PIK3R1P27986 724 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 RNF4P78317 190 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 PMP22Q01453 160 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 ZNF844Q08AG5 666 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 SLC25A25Q6KCM7 469 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 TMEM178AQ8NBL3 297 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 OR8K3Q8NH51 312 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 FBXL20Q96IG2 436 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 SMC6Q96SB8 1091 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 GATA5Q9BWX5 397 aaPredicted RBP21.96■■□□□ 1.11
VARS-217ENST00000440048 SHCBP1LQ9BZQ2 653 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 MYOTQ9UBF9 498 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 PCDHA9Q9Y5H5 950 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 UTP20O75691 2785 aaKnown RBP21.96■■□□□ 1.11
VARS-217ENST00000440048 CROCCQ5TZA2 2017 aa21.96■■□□□ 1.11
VARS-217ENST00000440048 TRIM13O60858 407 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 SLC25A12O75746 678 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 OR2J2O76002 312 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 IGKV3-11P04433 115 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 SLC35E2P0CK97 266 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 SERPINB3P29508 390 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 SSR4P51571 173 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 HK2P52789 917 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 SRSF11Q05519 484 aaKnown RBP21.95■■□□□ 1.1
VARS-217ENST00000440048 SPRED3Q2MJR0 410 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 KRT71Q3SY84 523 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 GALNTL5Q7Z4T8 443 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 MMP21Q8N119 569 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 TMEM156Q8N614 296 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 OR4K14Q8NGD5 310 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 DNAJB8Q8NHS0 232 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 PRR7Q8TB68 274 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 TCP10LQ8TDR4 215 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 NR4A3Q92570 626 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 RIT1Q92963 219 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 APIPQ96GX9 242 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 ART5Q96L15 291 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 MCM8Q9UJA3 840 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 CES1P1Q9UKY3 287 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 ICE1Q9Y2F5 2266 aa21.95■■□□□ 1.1
VARS-217ENST00000440048 C1orf226A1L170 272 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms