RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 NDNFQ8TB73 568 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 NANPQ8TBE9 248 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 HAVCR2Q8TDQ0 301 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 LCN9Q8WX39 176 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 PYCR2Q96C36 320 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 RHBDF1Q96CC6 855 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 SSX3Q99909 188 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 SLC30A2Q9BRI3 323 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 IFT27Q9BW83 186 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 CPNE5Q9HCH3 593 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TREX1Q9NSU2 369 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 UFSP2Q9NUQ7 469 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TVP23BQ9NYZ1 205 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 MAP10Q9P2G4 905 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 SCML2Q9UQR0 700 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 GPR45Q9Y5Y3 372 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 A8MV72 311 aaPredicted RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 MANBAO00462 879 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 WNT9AO14904 365 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 MID1O15344 667 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 SEPT4O43236 478 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 OR1F1O43749 312 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 OR1I1O60431 355 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 FKTNO75072 461 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 OPN1SWP03999 348 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 ITGB1P05556 798 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TFPIP10646 304 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 HOXD8P13378 290 aaPredicted RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 CPN2P22792 545 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 GADD45AP24522 165 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 ACVR2AP27037 513 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 SHMT2P34897 504 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 MAGEA2P43356 314 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 HTR6P50406 440 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TSPAN5P62079 268 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 GRSF1Q12849 480 aaKnown RBP eCLIP6.11□□□□□ -1.43
BDNF-211ENST00000439476 CDK5R2Q13319 367 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 GALEQ14376 348 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 XKR4Q5GH76 650 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 NLRC3Q7RTR2 1065 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 FUNDC1Q8IVP5 155 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 GID4Q8IVV7 300 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 UMODL1-AS1Q8N2C9 162 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TOMM5Q8N4H5 51 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 KRTCAP2Q8N6L1 136 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 ZBTB44Q8NCP5 570 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 NEK7Q8TDX7 302 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 OSTF1Q92882 214 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 PGAP3Q96FM1 320 aaPredicted RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 GFM1Q96RP9 751 aaKnown RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 PHOX2BQ99453 314 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 MTERF1Q99551 399 aaKnown RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 C11orf16Q9NQ32 467 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 ZCCHC3Q9NUD5 404 aaKnown RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 NLE1Q9NVX2 485 aaPredicted RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 TMEM248Q9NWD8 314 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 LYARQ9NX58 379 aaKnown RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 NLGN3Q9NZ94 848 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TINAGQ9UJW2 476 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 MRPS17Q9Y2R5 130 aaKnown RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 SPIN1Q9Y657 262 aaPredicted RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 FKBP7Q9Y680 259 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 CDH10Q9Y6N8 788 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TBC1D3DA0A087WVF3 549 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TBC1D3IA0A087WXS9 549 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TBC1D3EA0A087X179 549 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TBC1D3KA0A087X1G2 549 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TBC1D3FA6NER0 549 aaPredicted RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 ZBTB42B2RXF5 422 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 ANKRD66B4E2M5 251 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TBC1D3LB9A6J9 549 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 HAS3O00219 553 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 PSMD9O00233 223 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 SOCS5O75159 536 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 GSRP00390 522 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 IFNA21P01568 189 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 LCKP06239 509 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TBC1D3HP0C7X1 549 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 DGKGP49619 791 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 CDK6Q00534 326 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 GAS6Q14393 721 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 ZNF234Q14588 700 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 ABRAXAS2Q15018 415 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 PLEKHS1Q5SXH7 462 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 UBXN11Q5T124 520 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 MPP7Q5T2T1 576 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TBC1D3GQ6DHY5 549 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TBC1D3CQ6IPX1 549 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 PGBD2Q6P3X8 592 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TMEM220Q6QAJ8 160 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 ABHD13Q7L211 337 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 SSX9Q7RTT3 188 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 AMIGO1Q86WK6 493 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TBC1D3Q8IZP1 549 aaPredicted RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 CAMKVQ8NCB2 501 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 CHDHQ8NE62 594 aaPredicted RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 FBXO22Q8NEZ5 403 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 OR10H4Q8NGA5 316 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 KAT2AQ92830 837 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 IL4I1Q96RQ9 567 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms