RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 ATG4BQ9Y4P1 393 aa12.51□□□□□ -0.41
GARNL3-206ENST00000439286 TNPO3Q9Y5L0 923 aaKnown RBP12.51□□□□□ -0.41
GARNL3-206ENST00000439286 CENPEQ02224 2701 aa12.51□□□□□ -0.41
GARNL3-206ENST00000439286 CRYBG3Q68DQ2 2970 aa12.51□□□□□ -0.41
GARNL3-206ENST00000439286 DIDO1Q9BTC0 2240 aaKnown RBP12.5□□□□□ -0.41
GARNL3-206ENST00000439286 TOXO94900 526 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 ZWINTO95229 277 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 GABRA1P14867 456 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 MSX1P28360 303 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 PIGAP37287 484 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 PIK3CGP48736 1102 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 IGLV3-21P80748 117 aaPredicted RBP12.5□□□□□ -0.41
GARNL3-206ENST00000439286 TNFRSF17Q02223 184 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 MYBPHQ13203 477 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 ACAP2Q15057 778 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 PFKFB4Q16877 469 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 EMC4Q5J8M3 183 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 RNF111Q6ZNA4 994 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 TMEM200AQ86VY9 491 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 DMRTC2Q8IXT2 367 aaPredicted RBP12.5□□□□□ -0.41
GARNL3-206ENST00000439286 LIX1Q8N485 282 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 RPRMLQ8N4K4 120 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 ACBD4Q8NC06 268 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 FAM13CQ8NE31 585 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 RHEBL1Q8TAI7 183 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 RIT1Q92963 219 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 MRRFQ96E11 262 aaKnown RBP12.5□□□□□ -0.41
GARNL3-206ENST00000439286 SPACA9Q96E40 222 aaPredicted RBP12.5□□□□□ -0.41
GARNL3-206ENST00000439286 FBXL20Q96IG2 436 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 JSRP1Q96MG2 331 aaPredicted RBP12.5□□□□□ -0.41
GARNL3-206ENST00000439286 TTYH2Q9BSA4 534 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 SORBS1Q9BX66 1292 aaKnown RBP12.5□□□□□ -0.41
GARNL3-206ENST00000439286 ZFP64Q9NPA5 681 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 DMRT3Q9NQL9 472 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 IGSF5Q9NSI5 407 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 KCNN3Q9UGI6 736 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 SCN3AQ9NY46 2000 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 ZGRF1Q86YA3 2104 aa12.5□□□□□ -0.41
GARNL3-206ENST00000439286 SVILO95425 2214 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 OR6C76A6NM76 312 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 PROM1O43490 865 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 UGDHO60701 494 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 GPR75O95800 540 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 GLI4P10075 376 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 PHBP35232 272 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 ALDH18A1P54886 795 aaKnown RBP12.49□□□□□ -0.41
GARNL3-206ENST00000439286 RPS13P62277 151 aaKnown RBP12.49□□□□□ -0.41
GARNL3-206ENST00000439286 HERVK_113P63132 956 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 ERVK-8P63133 956 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 FOXO1Q12778 655 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 DLG1Q12959 904 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 ZNF267Q14586 743 aaPredicted RBP12.49□□□□□ -0.41
GARNL3-206ENST00000439286 SETDB1Q15047 1291 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 UAP1Q16222 522 aaPredicted RBP12.49□□□□□ -0.41
GARNL3-206ENST00000439286 CPSF6Q16630 551 aaKnown RBP eCLIP12.49□□□□□ -0.41
GARNL3-206ENST00000439286 ZNF791Q3KP31 576 aaPredicted RBP12.49□□□□□ -0.41
GARNL3-206ENST00000439286 C1orf185Q5T7R7 199 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 C6orf163Q5TEZ5 329 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 MROH9Q5TGP6 573 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 HLA-DQA1Q5Y7H0 255 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 TMEM198Q66K66 360 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 C18orf63Q68DL7 685 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 C9orf40Q8IXQ3 194 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 FBXO25Q8TCJ0 367 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 PAQR8Q8TEZ7 354 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 KCTD4Q8WVF5 259 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 LRRC46Q96FV0 321 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 ERVK-6Q9BXR3 956 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 PYCARDQ9ULZ3 195 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 ERVK-19Q9WJR5 959 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 TSC22D4Q9Y3Q8 395 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 LIPGQ9Y5X9 500 aa12.49□□□□□ -0.41
GARNL3-206ENST00000439286 H0YIV9 168 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 PLPP1O14494 284 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 TP53I11O14683 189 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 KLK8O60259 260 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 ZNF354AO60765 605 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-206ENST00000439286 IGKV3-11P04433 115 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 C2P06681 752 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 FAM58BPP0C7Q3 252 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 NR2F6P10588 404 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 IGFBP2P18065 325 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 TYK2P29597 1187 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 GMPRP36959 345 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 NR0B1P51843 470 aaKnown RBP12.48□□□□□ -0.41
GARNL3-206ENST00000439286 RPP38P78345 283 aaKnown RBP12.48□□□□□ -0.41
GARNL3-206ENST00000439286 CUL3Q13618 768 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 GTF2H2Q13888 395 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 SLC25A35Q3KQZ1 300 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 TBCELQ5QJ74 424 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 PRAMEF20Q5VT98 475 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 TTC19Q6DKK2 380 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-206ENST00000439286 GTF2H2CQ6P1K8 395 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 NUDT13Q86X67 352 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 FBXW8Q8N3Y1 598 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 RNF175Q8N4F7 328 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 DOHHQ9BU89 302 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 IPPKQ9H8X2 491 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 SEMA4BQ9NPR2 832 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-206ENST00000439286 NPDC1Q9NQX5 325 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms