RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 MKRN2OSH3BPM6 223 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 GPRIN2O60269 458 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 OR10H2O60403 315 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 MITFO75030 526 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 TRUB2O95900 331 aaKnown RBP2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 GHRP10912 638 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 LIPCP11150 499 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 VPREB1P12018 145 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 SCG2P13521 617 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 DARSP14868 501 aaKnown RBP2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 PSMC3P17980 439 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 ARL3P36405 182 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 CAPGP40121 348 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 MNDAP41218 407 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 QARSP47897 775 aaKnown RBP2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 SETQ01105 290 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 IL9RQ01113 521 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 CD300CQ08708 224 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 TAF10Q12962 218 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 ILKQ13418 452 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 RALBP1Q15311 655 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 ZNF74Q16587 644 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 ODF4Q2M2E3 257 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 NADK2Q4G0N4 442 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 CASC10Q5T4H9 136 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 NOTUMQ6P988 496 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 TMCO3Q6UWJ1 677 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 ZNF841Q6ZN19 808 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 GDPGP1Q6ZNW5 385 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 MMS22LQ6ZRQ5 1243 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 HAUS6Q7Z4H7 955 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 LDB1Q86U70 411 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 SLC25A42Q86VD7 318 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 NUDT13Q86X67 352 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 FBXO16Q8IX29 292 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 WDTC1Q8N5D0 677 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 NAXEQ8NCW5 288 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 ITFG1Q8TB96 612 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 C19orf60Q96EN9 201 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 ATXN7L3BQ96GX2 97 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 C1orf147Q96MC9 270 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 TDRD1Q9BXT4 1180 aaKnown RBP2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 HRH4Q9H3N8 390 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 TUBB1Q9H4B7 451 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 CWH43Q9H720 699 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 HEXA-AS1Q9H8Q6 139 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 SERINC1Q9NRX5 453 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 ZNF107Q9UII5 783 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 STUB1Q9UNE7 303 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 KIF20BQ96Q89 1820 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 PKHD1P08F94 4074 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 IGKV6D-21A0A0A0MT36 114 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 MYBPHLA2RUH7 354 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 C2orf81A6NN90 581 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 TFECO14948 347 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 PRAMEF11O60813 436 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 POP4O95707 220 aaKnown RBP2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 CHMP24386 653 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 OXTRP30559 389 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 XGP55808 180 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 CSNK1G2P78368 415 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 DLK1P80370 383 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 MAMLD1Q13495 774 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 DEFB113Q30KQ7 82 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 GPR157Q5UAW9 335 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 SHEQ5VZ18 495 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 FAM166AQ6J272 317 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 UGT3A1Q6NUS8 523 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 MCM10Q7L590 875 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 CEACAM19Q7Z692 300 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 TMEM173Q86WV6 379 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 ZFAND4Q86XD8 727 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 GPD1LQ8N335 351 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 MRAPQ8TCY5 172 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 NPRL2Q8WTW4 380 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 SCFD2Q8WU76 684 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 RMND5BQ96G75 393 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 PPM1MQ96MI6 270 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 MTMR9Q96QG7 549 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 SPAG5Q96R06 1193 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 RANBP9Q96S59 729 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 ITPAQ9BY32 194 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 MAF1Q9H063 256 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 TNMDQ9H2S6 317 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 ZFP14Q9HCL3 533 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 YAE1D1Q9NRH1 226 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 C9orf78Q9NZ63 289 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 ORC3Q9UBD5 711 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 KLHL21Q9UJP4 597 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 WIPI2Q9Y4P8 454 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 NME7Q9Y5B8 376 aa2.2□□□□□ -2.06
HMGB1P18-201ENST00000438801 HCFC1P51610 2035 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 A0A087WUV0 522 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 A0A1B0GUH1 482 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 CCDC189A1A4V9 331 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 PI4KAP2A4QPH2 592 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 SHISA9B4DS77 424 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 FLOT1O75955 427 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 ZWINTO95229 277 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 HPP00738 406 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms