RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 FAM13CQ8NE31 585 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 OR52N2Q8NGI0 321 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 OR8K3Q8NH51 312 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 SLC2A12Q8TD20 617 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 SARAFQ96BY9 339 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 LRRC46Q96FV0 321 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 RBM18Q96H35 190 aaKnown RBP7.19□□□□□ -1.26
VPS50-204ENST00000438395 QRFPRQ96P65 431 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 GAL3ST4Q96RP7 486 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 CSF3RQ99062 836 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 WDR83Q9BRX9 315 aaKnown RBP7.19□□□□□ -1.26
VPS50-204ENST00000438395 CAB39LQ9H9S4 337 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 LIN28AQ9H9Z2 209 aaKnown RBP7.19□□□□□ -1.26
VPS50-204ENST00000438395 WDR41Q9HAD4 459 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 IL1RL2Q9HB29 575 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 SAYSD1Q9NPB0 183 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 ALKBH4Q9NXW9 302 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 MOCS1Q9NZB8 636 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 OPTCQ9UBM4 332 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 B4GALT7Q9UBV7 327 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 PHF11Q9UIL8 331 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 ZNF223Q9UK11 482 aaPredicted RBP7.19□□□□□ -1.26
VPS50-204ENST00000438395 BOKQ9UMX3 212 aaPredicted RBP7.19□□□□□ -1.26
VPS50-204ENST00000438395 SNX24Q9Y343 169 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 SAR1BQ9Y6B6 198 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 ITPR3Q14573 2671 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 A0A0G2JMM0 328 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 IQANK1A0A1B0GTG1 560 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 A0A1W2PPB8 328 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 A0A1W2PRS3 328 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 KIR3DP1A8MWS1 328 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 E7ESA3 106 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 CYR61O00622 381 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 PRKNO60260 465 aaPredicted RBP7.18□□□□□ -1.26
VPS50-204ENST00000438395 WDR1O75083 606 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 LDB3O75112 727 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 SH3BGRLO75368 114 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 PIAS1O75925 651 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 CNR1P21554 472 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 HIST1H1TP22492 207 aaPredicted RBP7.18□□□□□ -1.26
VPS50-204ENST00000438395 ATP5A1P25705 553 aaKnown RBP7.18□□□□□ -1.26
VPS50-204ENST00000438395 SPRP35270 261 aaPredicted RBP7.18□□□□□ -1.26
VPS50-204ENST00000438395 GGT5P36269 586 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 BUD31P41223 144 aaPredicted RBP7.18□□□□□ -1.26
VPS50-204ENST00000438395 MAGEA5P43359 124 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 RPL21P46778 160 aaKnown RBP7.18□□□□□ -1.26
VPS50-204ENST00000438395 NUP107P57740 925 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 RAB10P61026 200 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 RAC1P63000 192 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 RNF4P78317 190 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 ASPHQ12797 758 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 SLC10A1Q14973 349 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 TBCCQ15814 346 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 ZNF750Q32MQ0 723 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 GXYLT1Q4G148 440 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 SLC29A4Q7RTT9 530 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 MAATS1Q7Z4T9 603 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 CCDC25Q86WR0 208 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 DND1Q8IYX4 353 aaKnown RBP7.18□□□□□ -1.26
VPS50-204ENST00000438395 MARVELD2Q8N4S9 558 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 TMEM251Q8N6I4 163 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 ACOT4Q8N9L9 421 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 PDPRQ8NCN5 879 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 TMEM52Q8NDY8 209 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 STAG3L4Q8TBR4 150 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 PTPMT1Q8WUK0 201 aaPredicted RBP7.18□□□□□ -1.26
VPS50-204ENST00000438395 ESAMQ96AP7 390 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 REPS1Q96D71 796 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 CMTM7Q96FZ5 175 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 SCYL1Q96KG9 808 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 GPR22Q99680 433 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 RBBP8Q99708 897 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 MAPKAP1Q9BPZ7 522 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 PELOQ9BRX2 385 aaKnown RBP7.18□□□□□ -1.26
VPS50-204ENST00000438395 TMEM79Q9BSE2 394 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 CNPPD1Q9BV87 410 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 MS4A8Q9BY19 250 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 CD244Q9BZW8 370 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 UCK2Q9BZX2 261 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 AICDAQ9GZX7 198 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 DPH5Q9H2P9 285 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 ALG9Q9H6U8 611 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 ZDHHC11Q9H8X9 412 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 NMRAL1Q9HBL8 299 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 PNPLA3Q9NST1 481 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 DEPPQ9NTK1 212 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 MS4A12Q9NXJ0 267 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 NUDT4Q9NZJ9 180 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 RNF14Q9UBS8 474 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 VTI1BQ9UEU0 232 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 KCNN3Q9UGI6 736 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 ADGRE2Q9UHX3 823 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 EDARQ9UNE0 448 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 MTO1Q9Y2Z2 717 aaKnown RBP7.18□□□□□ -1.26
VPS50-204ENST00000438395 NF1P21359 2839 aa7.18□□□□□ -1.26
VPS50-204ENST00000438395 TRGV5A0A0B4J1U4 118 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 TCRBV9S1A1TA0A576 114 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 SYCE1LA8MT33 242 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 CAPN14A8MX76 684 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 K7EPI3 171 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms