RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 OGFOD3Q6PK18 319 aa19.94■□□□□ 0.78
PTPRF-207ENST00000436724 CEACAM20Q6UY09 585 aa19.94■□□□□ 0.78
PTPRF-207ENST00000436724 ABHD13Q7L211 337 aa19.94■□□□□ 0.78
PTPRF-207ENST00000436724 C6orf120Q7Z4R8 191 aa19.94■□□□□ 0.78
PTPRF-207ENST00000436724 ZC3H7AQ8IWR0 971 aaKnown RBP19.94■□□□□ 0.78
PTPRF-207ENST00000436724 EID3Q8N140 333 aa19.94■□□□□ 0.78
PTPRF-207ENST00000436724 HORMAD2Q8N7B1 307 aa19.94■□□□□ 0.78
PTPRF-207ENST00000436724 TSPAN14Q8NG11 270 aa19.94■□□□□ 0.78
PTPRF-207ENST00000436724 TMBIM1Q969X1 311 aa19.94■□□□□ 0.78
PTPRF-207ENST00000436724 CCDC3Q9BQI4 270 aa19.94■□□□□ 0.78
PTPRF-207ENST00000436724 ANKRD60Q9BZ19 345 aa19.94■□□□□ 0.78
PTPRF-207ENST00000436724 LILRA5A6NI73 299 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 EI24O14681 340 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 NR2F6P10588 404 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 NTSP30990 170 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 LIM2P55344 173 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 KLHL35Q6PF15 583 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 CBLL1Q75N03 491 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 PSMA8Q8TAA3 256 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 TPD52L3Q96J77 140 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 SERINC2Q96SA4 455 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 C9orf16Q9BUW7 83 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.93■□□□□ 0.78
PTPRF-207ENST00000436724 ASPSCR1Q9BZE9 553 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 MAGIXQ9H6Y5 334 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 ASXL3Q9C0F0 2248 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 MYO1GB0I1T2 1018 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 ZSCAN9O15535 394 aaPredicted RBP19.93■□□□□ 0.78
PTPRF-207ENST00000436724 BNC1Q01954 994 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 EEF1A2Q05639 463 aaKnown RBP19.93■□□□□ 0.78
PTPRF-207ENST00000436724 MLC1Q15049 377 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 TMTC4Q5T4D3 741 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 LYSMD4Q5XG99 296 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 SPRED1Q7Z699 444 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 OR5T3Q8NGG3 340 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 RAB8BQ92930 207 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 MPP4Q96JB8 637 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 HSH2DQ96JZ2 352 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 TGM7Q96PF1 710 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 TMEM38AQ9H6F2 299 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 PTTG2Q9NZH5 202 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 DAPP1Q9UN19 280 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 RNF215Q9Y6U7 377 aa19.93■□□□□ 0.78
PTPRF-207ENST00000436724 PI4KAP42356 2102 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 TMEM229AB2RXF0 380 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 B3GALT2O43825 422 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 PRSS23O95084 383 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 TDGF1P13385 188 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 CPN2P22792 545 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 HOXA6P31267 233 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 DSTNP60981 165 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 CDK6Q00534 326 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 SIGLEC14Q08ET2 396 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 TEAD4Q15561 434 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 GPR19Q15760 415 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 OTUD3Q5T2D3 398 aaPredicted RBP19.92■□□□□ 0.78
PTPRF-207ENST00000436724 BORAQ6PGQ7 559 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 FKBP9P1Q75LS8 142 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 EIF3MQ7L2H7 374 aaKnown RBP19.92■□□□□ 0.78
PTPRF-207ENST00000436724 PACRGLQ8N7B6 248 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 C10orf90Q96M02 699 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 SERHL2Q9H4I8 314 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 ANKRA2Q9H9E1 313 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 UCK1Q9HA47 277 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 PNPLA3Q9NST1 481 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 LRIT1Q9P2V4 623 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 KLHL3Q9UH77 587 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 RPS6KA6Q9UK32 745 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 ABCG2Q9UNQ0 655 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 ENTPD4Q9Y227 616 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 NAALAD2Q9Y3Q0 740 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 BDP1A6H8Y1 2624 aa19.92■□□□□ 0.78
PTPRF-207ENST00000436724 ARID1BQ8NFD5 2236 aaPredicted RBP19.92■□□□□ 0.78
PTPRF-207ENST00000436724 H3BSA7 217 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 CASC3O15234 703 aaKnown RBP19.91■□□□□ 0.78
PTPRF-207ENST00000436724 SIM1P81133 766 aaPredicted RBP19.91■□□□□ 0.78
PTPRF-207ENST00000436724 TNFRSF17Q02223 184 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 B3GNT6Q6ZMB0 384 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 ZDHHC21Q8IVQ6 265 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 OR4N5Q8IXE1 308 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 OTUB1Q96FW1 271 aaPredicted RBP19.91■□□□□ 0.78
PTPRF-207ENST00000436724 FSCN3Q9NQT6 498 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 DNAJB9Q9UBS3 223 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 CCDC163A0A0D9SF12 145 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 RHPN2P1A8MT19 583 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 hCG_2039718K7EN88 272 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 DIRAS1O95057 198 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 RASAL1O95294 804 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 GIMD1P0DJR0 217 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 BUD31P41223 144 aaPredicted RBP19.91■□□□□ 0.78
PTPRF-207ENST00000436724 CTSKP43235 329 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 PRKAG1P54619 331 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 VLDLRP98155 873 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 CYBRD1Q53TN4 286 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 KRT80Q6KB66 452 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 SLC44A2Q8IWA5 706 aaPredicted RBP19.91■□□□□ 0.78
PTPRF-207ENST00000436724 HS3ST5Q8IZT8 346 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 SDR16C5Q8N3Y7 309 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 ZNF655Q8N720 491 aaPredicted RBP19.91■□□□□ 0.78
PTPRF-207ENST00000436724 MAGEE2Q8TD90 523 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms