RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ZNF749O43361 778 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 CHST10O43529 356 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 ERAL1O75616 437 aaKnown RBP17.17■□□□□ 0.34
HMGN1-206ENST00000431390 SORBS2O94875 1100 aaKnown RBP17.17■□□□□ 0.34
HMGN1-206ENST00000431390 RNH1P13489 461 aaKnown RBP17.17■□□□□ 0.34
HMGN1-206ENST00000431390 E2F1Q01094 437 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 SELPLGQ14242 412 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 SOWAHCQ53LP3 525 aaPredicted RBP17.17■□□□□ 0.34
HMGN1-206ENST00000431390 C1orf146Q5VVC0 180 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 BPHLQ86WA6 291 aaPredicted RBP17.17■□□□□ 0.34
HMGN1-206ENST00000431390 PSMA8Q8TAA3 256 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 TANKQ92844 425 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 ASB9Q96DX5 294 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 MMABQ96EY8 250 aaPredicted RBP17.17■□□□□ 0.34
HMGN1-206ENST00000431390 CNRIP1Q96F85 164 aaPredicted RBP17.17■□□□□ 0.34
HMGN1-206ENST00000431390 BBS4Q96RK4 519 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 TRIM8Q9BZR9 551 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 ALG2Q9H553 416 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 DENND2DQ9H6A0 471 aaPredicted RBP17.17■□□□□ 0.34
HMGN1-206ENST00000431390 CDC14AQ9UNH5 594 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 SRPK3Q9UPE1 567 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 CLCA2Q9UQC9 943 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 ZNF780BQ9Y6R6 833 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 ITPR1Q14643 2758 aa17.17■□□□□ 0.34
HMGN1-206ENST00000431390 LOC400499M0QZD8 3231 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 LAMA5O15230 3695 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 EVPLLA8MZ36 301 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 DSCR3O14972 297 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 ABCB1P08183 1280 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-206ENST00000431390 CSNK2A2P19784 350 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-206ENST00000431390 CSTF2P33240 577 aaKnown RBP eCLIP17.16■□□□□ 0.34
HMGN1-206ENST00000431390 LIPEQ05469 1076 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 BNIP2Q12982 314 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 TRIM25Q14258 630 aaKnown RBP17.16■□□□□ 0.34
HMGN1-206ENST00000431390 FAM180BQ6P0A1 224 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 RBM44Q6ZP01 1051 aaKnown RBP17.16■□□□□ 0.34
HMGN1-206ENST00000431390 TTLL10Q6ZVT0 673 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 SLCO6A1Q86UG4 719 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 OR4K14Q8NGD5 310 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 ZFP90Q8TF47 636 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 ZNF681Q96N22 645 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 AMDHD1Q96NU7 426 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 OR6C1Q96RD1 312 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 ECSITQ9BQ95 431 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 THUMPD3Q9BV44 507 aaKnown RBP17.16■□□□□ 0.34
HMGN1-206ENST00000431390 GLIPR2Q9H4G4 154 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 RARRES3Q9UL19 164 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 CORO2BQ9UQ03 480 aa17.16■□□□□ 0.34
HMGN1-206ENST00000431390 WASHC1A8K0Z3 465 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 CLIC1O00299 241 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 CCKBRP32239 447 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 MPIP34949 423 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 GSK3BP49841 420 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 PDX1P52945 283 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 TRAP1Q12931 704 aaKnown RBP17.15■□□□□ 0.34
HMGN1-206ENST00000431390 GAB1Q13480 694 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 GPR155Q7Z3F1 870 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 B3GNT8Q7Z7M8 397 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 DTWD1Q8N5C7 304 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 AGBL5Q8NDL9 886 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 WDR60Q8WVS4 1066 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 AURKBQ96GD4 344 aaPredicted RBP17.15■□□□□ 0.34
HMGN1-206ENST00000431390 TRIM4Q9C037 500 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 MUC13Q9H3R2 512 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 IKZF5Q9H5V7 419 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 KAT8Q9H7Z6 458 aaKnown RBP17.15■□□□□ 0.34
HMGN1-206ENST00000431390 TPT1P8Q9HAU6 139 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 HCN3Q9P1Z3 774 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 MRPS33Q9Y291 106 aaKnown RBP17.15■□□□□ 0.34
HMGN1-206ENST00000431390 PCDHGA1Q9Y5H4 931 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 A0A1B0GX78 115 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 A8MUI8 341 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 RFPL3O75679 317 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 GPX2P18283 190 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 TCN1P20061 433 aaPredicted RBP17.15■□□□□ 0.34
HMGN1-206ENST00000431390 UQCRC2P22695 453 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 PPP2R1BP30154 601 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 NCBP2P52298 156 aaKnown RBP eCLIP17.15■□□□□ 0.34
HMGN1-206ENST00000431390 ACTR3P61158 418 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 HSPB3Q12988 150 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 KPNB1Q14974 876 aaKnown RBP17.15■□□□□ 0.34
HMGN1-206ENST00000431390 C16orf72Q14CZ0 275 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 MED25Q71SY5 747 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 ZNF551Q7Z340 670 aaPredicted RBP17.15■□□□□ 0.34
HMGN1-206ENST00000431390 GLRX5Q86SX6 157 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 FAM156AQ8NDB6 213 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 SUN3Q8TAQ9 357 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 ZNF583Q96ND8 569 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 KCTD14Q9BQ13 255 aaPredicted RBP17.15■□□□□ 0.34
HMGN1-206ENST00000431390 DPH2Q9BQC3 489 aaPredicted RBP17.15■□□□□ 0.34
HMGN1-206ENST00000431390 CXorf36Q9H7Y0 433 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 BCAP29Q9UHQ4 241 aa17.15■□□□□ 0.34
HMGN1-206ENST00000431390 ACACAQ13085 2346 aa17.14■□□□□ 0.34
HMGN1-206ENST00000431390 ACOT8O14734 319 aa17.14■□□□□ 0.33
HMGN1-206ENST00000431390 ALAS2P22557 587 aa17.14■□□□□ 0.33
HMGN1-206ENST00000431390 HTR1EP28566 365 aa17.14■□□□□ 0.33
HMGN1-206ENST00000431390 ABHD18Q0P651 414 aa17.14■□□□□ 0.33
HMGN1-206ENST00000431390 IL11RAQ14626 422 aa17.14■□□□□ 0.33
HMGN1-206ENST00000431390 FXNQ16595 210 aa17.14■□□□□ 0.33
HMGN1-206ENST00000431390 RHBDD2Q6NTF9 364 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms