RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 SMOQ99835 787 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 C17orf62Q9BQA9 187 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 NLE1Q9NVX2 485 aaPredicted RBP13.89□□□□□ -0.19
PTPRU-204ENST00000428026 OR6C74A6NCV1 312 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 E7ESA3 106 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 BCKDHAP12694 445 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 GRPRP30550 384 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 PYCR1P32322 319 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 BLOC1S3Q6QNY0 202 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 ENPP7Q6UWV6 458 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 SHFQ7M4L6 423 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 TSTD1Q8NFU3 115 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 OR51A7Q8NH64 312 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 TFGQ92734 400 aaPredicted RBP13.89□□□□□ -0.19
PTPRU-204ENST00000428026 A0A0D9SEW6 157 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 HSD17B2P37059 387 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 RBMXP38159 391 aaKnown RBP13.89□□□□□ -0.19
PTPRU-204ENST00000428026 RPS26P62854 115 aaKnown RBP13.89□□□□□ -0.19
PTPRU-204ENST00000428026 PDGFRLQ15198 375 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 PNCKQ6P2M8 343 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 UGT2A3Q6UWM9 527 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 C14orf80Q86SX3 495 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 MRM3Q9HC36 420 aaKnown RBP13.89□□□□□ -0.19
PTPRU-204ENST00000428026 TMEM184CQ9NVA4 438 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 TMEM98Q9Y2Y6 226 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 HEBP2Q9Y5Z4 205 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 MYH13Q9UKX3 1938 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 SCDO00767 359 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 T-ENOLP0DO92 83 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 GABARAPL2P60520 117 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 FAM189BP81408 668 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 SLC10A2Q12908 348 aaPredicted RBP13.89□□□□□ -0.19
PTPRU-204ENST00000428026 BEND4Q6ZU67 534 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 TMPRSS12Q86WS5 348 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 TSPEARQ8WU66 669 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 MSLNLQ96KJ4 702 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 LRR1Q96L50 414 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 CACNG6Q9BXT2 260 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 SLC5A7Q9GZV3 580 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 SMOC2Q9H3U7 446 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 SIX4Q9UIU6 781 aa13.89□□□□□ -0.19
PTPRU-204ENST00000428026 HTR3EA5X5Y0 456 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 NUPL2O15504 423 aaKnown RBP13.88□□□□□ -0.19
PTPRU-204ENST00000428026 ADH5P11766 374 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 PRKACAP17612 351 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 CHMP24386 653 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 EVI2BP34910 448 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 PUS10Q3MIT2 529 aaKnown RBP13.88□□□□□ -0.19
PTPRU-204ENST00000428026 EMC10Q5UCC4 262 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 TLDC1Q6P9B6 456 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 TMEM40Q8WWA1 233 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 KCNJ9Q92806 393 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 NPLQ9BXD5 320 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-204ENST00000428026 NME4O00746 187 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 BCAS1O75363 584 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-204ENST00000428026 BPNT1O95861 308 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 TIMP1P01033 207 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 CDKN2DP55273 166 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 PITX1P78337 314 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-204ENST00000428026 GPRC6AQ5T6X5 926 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 PDZD9Q8IXQ8 264 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 BEST3Q8N1M1 668 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 PKD1L3Q7Z443 1732 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 LAMB4A4D0S4 1761 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 B4GALT2O60909 372 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 HAPLN1P10915 354 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-204ENST00000428026 PRKACBP22694 351 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 ATP5A1P25705 553 aaKnown RBP13.88□□□□□ -0.19
PTPRU-204ENST00000428026 AMZ1Q400G9 498 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 TAS1R3Q7RTX0 852 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 LMO3Q8TAP4 145 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 MYRFLQ96LU7 910 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 ZNF778Q96MU6 729 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 FEVQ99581 238 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 ZBTB20Q9HC78 741 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-204ENST00000428026 STRCQ7RTU9 1775 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 NWD2Q9ULI1 1742 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 EEF1E1-BLOC1S5C9J1V9 151 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 ZNF821O75541 412 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-204ENST00000428026 CRYZL1O95825 349 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 PTTG1O95997 202 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 CAPNS1P04632 268 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 NKAPLQ5M9Q1 402 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 ZNF584Q8IVC4 421 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 CCDC116Q8IYX3 515 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 MAPK15Q8TD08 544 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 SMPDL3AQ92484 453 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 SH3YL1Q96HL8 342 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-204ENST00000428026 CCDC32Q9BV29 185 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 FAAHO00519 579 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 B4GAT1O43505 415 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 LRP8Q14114 963 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 UPP1Q16831 310 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 DNM1P34Q6PK57 102 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 OR4E2Q8NGC2 313 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 HYLS1Q96M11 299 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 PSKH2Q96QS6 385 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 PAAF1Q9BRP4 392 aa13.88□□□□□ -0.19
PTPRU-204ENST00000428026 A0A1B0GVI7 797 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 SNNO75324 88 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms