RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 TEDDM1Q5T9Z0 273 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 TRMT10BQ6PF06 316 aaKnown RBP12.39□□□□□ -0.43
VEGFB-202ENST00000426086 LUZP2Q86TE4 346 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 TTLQ8NG68 377 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 ANKRD49Q8WVL7 239 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 MAIP1Q8WWC4 291 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 SLC44A1Q8WWI5 657 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 RHBDF1Q96CC6 855 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 HSPBAP1Q96EW2 488 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 EGFL8Q99944 293 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 TMEM79Q9BSE2 394 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 RBM24Q9BX46 236 aaKnown RBP12.39□□□□□ -0.43
VEGFB-202ENST00000426086 UGT2B28Q9BY64 529 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 UBQLN3Q9H347 655 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 NT5DC2Q9H857 520 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 COPS7BQ9H9Q2 264 aaPredicted RBP12.39□□□□□ -0.43
VEGFB-202ENST00000426086 CNIH4Q9P003 139 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 C6orf203Q9P0P8 240 aaPredicted RBP12.39□□□□□ -0.43
VEGFB-202ENST00000426086 COPS7AQ9UBW8 275 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 TRPS1Q9UHF7 1281 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 JMJD1CQ15652 2540 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 A0A088AWK7 358 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 SH3D21A4FU49 640 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 ANKDD1BA6NHY2 528 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 TAPBPO15533 448 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 SMPD2O60906 423 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 TRAPPC6AO75865 159 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 GOSR1O95249 250 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 CLPSP04118 112 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 ZNF10P21506 573 aaPredicted RBP12.38□□□□□ -0.43
VEGFB-202ENST00000426086 ATP5A1P25705 553 aaKnown RBP12.38□□□□□ -0.43
VEGFB-202ENST00000426086 STT3AP46977 705 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 CDK9P50750 372 aaKnown RBP12.38□□□□□ -0.43
VEGFB-202ENST00000426086 CDKL1Q00532 357 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 WIPI1Q5MNZ9 446 aaPredicted RBP12.38□□□□□ -0.43
VEGFB-202ENST00000426086 FAM45BPQ6NSW5 357 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 YTHDF3Q7Z739 585 aaKnown RBP12.38□□□□□ -0.43
VEGFB-202ENST00000426086 LRRC75A-AS1Q8N1F1 130 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 TXLNBQ8N3L3 684 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 SLC15A4Q8N697 577 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 ACOT4Q8N9L9 421 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 PPP1R14CQ8TAE6 165 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 FAM45AQ8TCE6 357 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 SMPDL3BQ92485 455 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 CERS2Q96G23 380 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 ZNF597Q96LX8 424 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 DACH2Q96NX9 599 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 GNRHR2Q96P88 292 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 GAL3ST4Q96RP7 486 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 SORBS1Q9BX66 1292 aaKnown RBP12.38□□□□□ -0.43
VEGFB-202ENST00000426086 LYRM4Q9HD34 91 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 OARD1Q9Y530 152 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 WIF1Q9Y5W5 379 aa12.38□□□□□ -0.43
VEGFB-202ENST00000426086 MED12Q93074 2177 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 NCF1BA6NI72 391 aaPredicted RBP12.37□□□□□ -0.43
VEGFB-202ENST00000426086 NCF1CA8MVU1 366 aaPredicted RBP12.37□□□□□ -0.43
VEGFB-202ENST00000426086 IL18BPO95998 194 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 HPNP05981 417 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 TMIGD3P0DMS9 266 aaPredicted RBP12.37□□□□□ -0.43
VEGFB-202ENST00000426086 NCF1P14598 390 aaPredicted RBP12.37□□□□□ -0.43
VEGFB-202ENST00000426086 EPORP19235 508 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 OPRM1P35372 400 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 NAGLUP54802 743 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 FBXW4P57775 412 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 HERVK_113P63132 956 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 ERVK-8P63133 956 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 DOC2AQ14183 400 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 TSNQ15631 228 aaKnown RBP12.37□□□□□ -0.43
VEGFB-202ENST00000426086 NTRK2Q16620 822 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 HP1BP3Q5SSJ5 553 aaPredicted RBP12.37□□□□□ -0.43
VEGFB-202ENST00000426086 RNASEH2BQ5TBB1 312 aaKnown RBP12.37□□□□□ -0.43
VEGFB-202ENST00000426086 SYDE1Q6ZW31 735 aaPredicted RBP12.37□□□□□ -0.43
VEGFB-202ENST00000426086 GALNT7Q86SF2 657 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 KRT78Q8N1N4 520 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 SIMC1Q8NDZ2 872 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 DIO2Q92813 273 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 MAGOHBQ96A72 148 aaKnown RBP12.37□□□□□ -0.43
VEGFB-202ENST00000426086 PERPQ96FX8 193 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 DGAT2Q96PD7 388 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 PIP5K1AQ99755 562 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 PIGQQ9BRB3 760 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 ERVK-6Q9BXR3 956 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 MS4A8Q9BY19 250 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 ERVK-19Q9WJR5 959 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 NPFFR2Q9Y5X5 522 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 PSAT1Q9Y617 370 aa12.37□□□□□ -0.43
VEGFB-202ENST00000426086 SYNDIG1LA6NDD5 238 aa12.36□□□□□ -0.43
VEGFB-202ENST00000426086 DEFB108AA8MXU0 73 aa12.36□□□□□ -0.43
VEGFB-202ENST00000426086 GOLGA6L6A8MZA4 724 aa12.36□□□□□ -0.43
VEGFB-202ENST00000426086 SAP18O00422 153 aaKnown RBP12.36□□□□□ -0.43
VEGFB-202ENST00000426086 CPN2P22792 545 aa12.36□□□□□ -0.43
VEGFB-202ENST00000426086 GSTM2P28161 218 aa12.36□□□□□ -0.43
VEGFB-202ENST00000426086 SERPINB3P29508 390 aa12.36□□□□□ -0.43
VEGFB-202ENST00000426086 MSH2P43246 934 aa12.36□□□□□ -0.43
VEGFB-202ENST00000426086 SLC37A1P57057 533 aa12.36□□□□□ -0.43
VEGFB-202ENST00000426086 PPP2R2BQ00005 443 aa12.36□□□□□ -0.43
VEGFB-202ENST00000426086 KRTAP1-1Q07627 177 aa12.36□□□□□ -0.43
VEGFB-202ENST00000426086 RCN2Q14257 317 aa12.36□□□□□ -0.43
VEGFB-202ENST00000426086 EBPQ15125 230 aaKnown RBP12.36□□□□□ -0.43
VEGFB-202ENST00000426086 NHSL2Q5HYW2 709 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms