RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ISLR2Q6UXK2 745 aa25.01■■□□□ 1.59
LDB1-202ENST00000425280 TMEM64Q6YI46 380 aa25.01■■□□□ 1.59
LDB1-202ENST00000425280 PRSS41Q7RTY9 318 aa25.01■■□□□ 1.59
LDB1-202ENST00000425280 SDR16C5Q8N3Y7 309 aa25.01■■□□□ 1.59
LDB1-202ENST00000425280 C19orf47Q8N9M1 422 aaKnown RBP25.01■■□□□ 1.59
LDB1-202ENST00000425280 SLC38A5Q8WUX1 472 aa25.01■■□□□ 1.59
LDB1-202ENST00000425280 CYGBQ8WWM9 190 aa25.01■■□□□ 1.59
LDB1-202ENST00000425280 LDHAL6BQ9BYZ2 381 aaPredicted RBP25.01■■□□□ 1.59
LDB1-202ENST00000425280 SMURF2Q9HAU4 748 aa25.01■■□□□ 1.59
LDB1-202ENST00000425280 ZCCHC3Q9NUD5 404 aaKnown RBP25.01■■□□□ 1.59
LDB1-202ENST00000425280 PSME2Q9UL46 239 aa25.01■■□□□ 1.59
LDB1-202ENST00000425280 DAPP1Q9UN19 280 aa25.01■■□□□ 1.59
LDB1-202ENST00000425280 TP53BP1Q12888 1972 aaPredicted RBP25.01■■□□□ 1.59
LDB1-202ENST00000425280 PIAS2O75928 621 aa25■■□□□ 1.59
LDB1-202ENST00000425280 GNAO1P09471 354 aa25■■□□□ 1.59
LDB1-202ENST00000425280 SZRD1Q7Z422 152 aa25■■□□□ 1.59
LDB1-202ENST00000425280 DHRSXQ8N5I4 330 aa25■■□□□ 1.59
LDB1-202ENST00000425280 SFXN5Q8TD22 340 aa25■■□□□ 1.59
LDB1-202ENST00000425280 SLC35G5Q96KT7 338 aa25■■□□□ 1.59
LDB1-202ENST00000425280 OSBPL10Q9BXB5 764 aa25■■□□□ 1.59
LDB1-202ENST00000425280 BAG5Q9UL15 447 aa25■■□□□ 1.59
LDB1-202ENST00000425280 ZNF780BQ9Y6R6 833 aa25■■□□□ 1.59
LDB1-202ENST00000425280 DPPA5A6NC42 116 aa25■■□□□ 1.59
LDB1-202ENST00000425280 ZNF860A6NHJ4 632 aa25■■□□□ 1.59
LDB1-202ENST00000425280 SLC9B1P1A6NJY1 282 aa25■■□□□ 1.59
LDB1-202ENST00000425280 TFPTP0C1Z6 253 aa25■■□□□ 1.59
LDB1-202ENST00000425280 MPIP34949 423 aa25■■□□□ 1.59
LDB1-202ENST00000425280 OLR1P78380 273 aa25■■□□□ 1.59
LDB1-202ENST00000425280 PPP2R2BQ00005 443 aa25■■□□□ 1.59
LDB1-202ENST00000425280 GPR19Q15760 415 aa25■■□□□ 1.59
LDB1-202ENST00000425280 OR52E8Q6IFG1 317 aa25■■□□□ 1.59
LDB1-202ENST00000425280 MAGED4Q96JG8 741 aa25■■□□□ 1.59
LDB1-202ENST00000425280 CSF3RQ99062 836 aa25■■□□□ 1.59
LDB1-202ENST00000425280 CCDC3Q9BQI4 270 aa25■■□□□ 1.59
LDB1-202ENST00000425280 STARD5Q9NSY2 213 aa25■■□□□ 1.59
LDB1-202ENST00000425280 USE1Q9NZ43 259 aa25■■□□□ 1.59
LDB1-202ENST00000425280 TMEM131Q92545 1883 aa24.99■■□□□ 1.59
LDB1-202ENST00000425280 BCHEP06276 602 aa24.99■■□□□ 1.59
LDB1-202ENST00000425280 CAPGP40121 348 aa24.99■■□□□ 1.59
LDB1-202ENST00000425280 DEFB110Q30KQ9 67 aa24.99■■□□□ 1.59
LDB1-202ENST00000425280 MAMSTRQ6ZN01 415 aa24.99■■□□□ 1.59
LDB1-202ENST00000425280 PADI2Q9Y2J8 665 aa24.99■■□□□ 1.59
LDB1-202ENST00000425280 SLC22A7Q9Y694 548 aa24.99■■□□□ 1.59
LDB1-202ENST00000425280 MYF6P23409 242 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 ITGA1P56199 1179 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 MAPK11Q15759 364 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 ANKRD34AQ69YU3 496 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 SHQ1Q6PI26 577 aaKnown RBP24.98■■□□□ 1.59
LDB1-202ENST00000425280 TMEM107Q6UX40 140 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 TSEN54Q7Z6J9 526 aaKnown RBP24.98■■□□□ 1.59
LDB1-202ENST00000425280 PATL1Q86TB9 770 aaKnown RBP24.98■■□□□ 1.59
LDB1-202ENST00000425280 HIPK1Q86Z02 1210 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 TMEM19Q96HH6 336 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 RBM4BQ9BQ04 359 aaKnown RBP24.98■■□□□ 1.59
LDB1-202ENST00000425280 RBM4Q9BWF3 364 aaKnown RBP24.98■■□□□ 1.59
LDB1-202ENST00000425280 OR51I1Q9H343 314 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 SOX17Q9H6I2 414 aaPredicted RBP24.98■■□□□ 1.59
LDB1-202ENST00000425280 LYRM4Q9HD34 91 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 PDP2Q9P2J9 529 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 RAB23Q9ULC3 237 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 C5orf58C9J3I9 102 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 IFNA14P01570 189 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 CTSBP07858 339 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 THRBP10828 461 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 PRKACGP22612 351 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 ADARB1P78563 741 aaKnown RBP24.98■■□□□ 1.59
LDB1-202ENST00000425280 C14orf28Q4W4Y0 310 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 RPS26P11Q5JNZ5 115 aaPredicted RBP24.98■■□□□ 1.59
LDB1-202ENST00000425280 OR9A2Q8NGT5 310 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 SPPL2AQ8TCT8 520 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 LZICQ8WZA0 190 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 FBXL20Q96IG2 436 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 MAP3K3Q99759 626 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 CD320Q9NPF0 282 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 MS4A12Q9NXJ0 267 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 THEGQ9P2T0 379 aa24.98■■□□□ 1.59
LDB1-202ENST00000425280 THADAQ6YHU6 1953 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 TNFAIP8O95379 198 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 PDGFBP01127 241 aaPredicted RBP24.97■■□□□ 1.59
LDB1-202ENST00000425280 OR12D1P0DN82 309 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 TNFRSF1BP20333 461 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 ZIK1Q3SY52 487 aaPredicted RBP24.97■■□□□ 1.59
LDB1-202ENST00000425280 IFI44LQ53G44 452 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 CWF19L1Q69YN2 538 aaKnown RBP24.97■■□□□ 1.59
LDB1-202ENST00000425280 KRT80Q6KB66 452 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 SLC44A2Q8IWA5 706 aaPredicted RBP24.97■■□□□ 1.59
LDB1-202ENST00000425280 ZNF696Q9H7X3 374 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 IFT80Q9P2H3 777 aaPredicted RBP24.97■■□□□ 1.59
LDB1-202ENST00000425280 NAALAD2Q9Y3Q0 740 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 A0A1B0GVT2 93 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 GALR3O60755 368 aaPredicted RBP24.97■■□□□ 1.59
LDB1-202ENST00000425280 MATN1P21941 496 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 TLX1P31314 330 aaPredicted RBP24.97■■□□□ 1.59
LDB1-202ENST00000425280 FNTBP49356 437 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 CLCN2P51788 898 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 PRKAG1P54619 331 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 SIM1P81133 766 aaPredicted RBP24.97■■□□□ 1.59
LDB1-202ENST00000425280 FAM92BQ6ZTR7 304 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 CEP68Q76N32 757 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 MCATQ8IVS2 390 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms