RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ACSM2AQ08AH3 577 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 IMPG1Q17R60 797 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 SPIN4Q56A73 249 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 TCHHL1Q5QJ38 904 aaPredicted RBP10.19□□□□□ -0.78
USP49-204ENST00000423567 NDUFAF5Q5TEU4 345 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 ACSM2BQ68CK6 577 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 FRMD7Q6ZUT3 714 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 CROCCP2Q86T23 111 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 HOMEZQ8IX15 550 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 C1orf52Q8N6N3 182 aaKnown RBP10.19□□□□□ -0.78
USP49-204ENST00000423567 BANPQ8N9N5 519 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 OR5L2Q8NGL0 311 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 DNAJB8Q8NHS0 232 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 SLC2A12Q8TD20 617 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 FAR1Q8WVX9 515 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 CNPPD1Q9BV87 410 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 TMEM109Q9BVC6 243 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 C12orf65Q9H3J6 166 aaKnown RBP10.19□□□□□ -0.78
USP49-204ENST00000423567 PSME2Q9UL46 239 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 ERVK-11Q9UQG0 969 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 YARS2Q9Y2Z4 477 aaKnown RBP10.19□□□□□ -0.78
USP49-204ENST00000423567 TIMM22Q9Y584 194 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 PCDHGB6Q9Y5F9 930 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 GCN1Q92616 2671 aaKnown RBP10.19□□□□□ -0.78
USP49-204ENST00000423567 BSNQ9UPA5 3926 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 BAHCC1Q9P281 2608 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 GNG14A0A1W2PPG7 69 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 C1orf226A1L170 272 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 ANKUB1A6NFN9 424 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 GOLGA6L10A6NI86 522 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 SPAG7O75391 227 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 ITGA10O75578 1167 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 SLC25A12O75746 678 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 SLC35E2P0CK97 266 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 EDN3P14138 238 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 TRHRP34981 398 aaPredicted RBP10.18□□□□□ -0.78
USP49-204ENST00000423567 UQCRFS1P47985 274 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 HLCSP50747 726 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 GALNT1Q10472 559 aaPredicted RBP10.18□□□□□ -0.78
USP49-204ENST00000423567 TBL3Q12788 808 aaKnown RBP10.18□□□□□ -0.78
USP49-204ENST00000423567 FHL5Q5TD97 284 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 SPINK14Q6IE38 97 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 SLC25A25Q6KCM7 469 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 C10orf107Q8IVU9 208 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 ARMC10Q8N2F6 343 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 ST6GALNAC3Q8NDV1 305 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 MDS2Q8NDY4 140 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 OR4K14Q8NGD5 310 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 OR8K3Q8NH51 312 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 ASB15Q8WXK1 588 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 RIT1Q92963 219 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 PPWD1Q96BP3 646 aaKnown RBP10.18□□□□□ -0.78
USP49-204ENST00000423567 SENP5Q96HI0 755 aaPredicted RBP10.18□□□□□ -0.78
USP49-204ENST00000423567 SIGLEC12Q96PQ1 595 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 FAM111AQ96PZ2 611 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 KCNA7Q96RP8 456 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 BARD1Q99728 777 aaKnown RBP10.18□□□□□ -0.78
USP49-204ENST00000423567 TRMOQ9BU70 441 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 CENPHQ9H3R5 247 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 RRAGDQ9NQL2 400 aaPredicted RBP10.18□□□□□ -0.78
USP49-204ENST00000423567 KLHL1Q9NR64 748 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 TEX10Q9NXF1 929 aaPredicted RBP10.18□□□□□ -0.78
USP49-204ENST00000423567 MCM8Q9UJA3 840 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 ZNF223Q9UK11 482 aaPredicted RBP10.18□□□□□ -0.78
USP49-204ENST00000423567 NTNG1Q9Y2I2 539 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 DOCK10Q96BY6 2186 aa10.18□□□□□ -0.78
USP49-204ENST00000423567 SERTM1A2A2V5 107 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 A8MVJ9 347 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 PCDH7O60245 1069 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 OR2J2O76002 312 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 ZIC2O95409 532 aaPredicted RBP10.17□□□□□ -0.78
USP49-204ENST00000423567 CBX6O95503 412 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 DDAH2O95865 285 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 CHEK2O96017 543 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 SP1P08047 785 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 MYZAPP0CAP1 466 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 UROSP10746 265 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 GALNSP34059 522 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 ALDH9A1P49189 494 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 HTR6P50406 440 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 ST13P50502 369 aaKnown RBP10.17□□□□□ -0.78
USP49-204ENST00000423567 XKP51811 444 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 RNF4P78317 190 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 HMGCS1Q01581 520 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 ZNF844Q08AG5 666 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 ZNF267Q14586 743 aaPredicted RBP10.17□□□□□ -0.78
USP49-204ENST00000423567 PCLAFQ15004 111 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 MAPKAPK3Q16644 382 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 SPRED3Q2MJR0 410 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 SPDYAQ5MJ70 313 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 CEP85LQ5SZL2 805 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 RNF111Q6ZNA4 994 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 SLC29A4Q7RTT9 530 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 GALNT12Q8IXK2 581 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 GPALPP1Q8IXQ4 340 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 CYP4Z2PQ8N1L4 340 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 FAM26EQ8N5C1 309 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 PRR7Q8TB68 274 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 TCP10LQ8TDR4 215 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 ZNF721Q8TF20 911 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms