RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 OR4K14Q8NGD5 310 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 MTERF3Q96E29 417 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 IP6K3Q96PC2 410 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 ALOXE3Q9BYJ1 711 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 TAS2R7Q9NYW3 318 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 RALYQ9UKM9 306 aaKnown RBP15.92■□□□□ 0.14
COL7A1-202ENST00000422991 UTS2RQ9UKP6 389 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 PSME2Q9UL46 239 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 MYOCOSA0A1B0GUC4 107 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 A0A1W2PS29 197 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 SHOX2O60902 331 aaPredicted RBP15.91■□□□□ 0.14
COL7A1-202ENST00000422991 COX6A1P12074 109 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 PCSK2P16519 638 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 PRPS1L1P21108 318 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 RPL3P39023 403 aaKnown RBP15.91■□□□□ 0.14
COL7A1-202ENST00000422991 ARFIP2P53365 341 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 OR4D2P58180 307 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 PLIN5Q00G26 463 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 SF3A3Q12874 501 aaKnown RBP eCLIP15.91■□□□□ 0.145e-6■■■■■ 39.5
COL7A1-202ENST00000422991 BIKQ13323 160 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 PCOLCEQ15113 449 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 GSTA3Q16772 222 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 PRSS53Q2L4Q9 553 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 SFT2D3Q587I9 215 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 CPZQ66K79 652 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 C7orf57Q8NEG2 295 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 C10orf82Q8WW14 230 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 EXOSC8Q96B26 276 aaKnown RBP15.91■□□□□ 0.14
COL7A1-202ENST00000422991 CNRIP1Q96F85 164 aaPredicted RBP15.91■□□□□ 0.14
COL7A1-202ENST00000422991 ZNF681Q96N22 645 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 CATSPER2Q96P56 530 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 WDR77Q9BQA1 342 aaPredicted RBP15.91■□□□□ 0.14
COL7A1-202ENST00000422991 ZNF700Q9H0M5 742 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 CPNE5Q9HCH3 593 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 ADAP2Q9NPF8 381 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 P4HTMQ9NXG6 502 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 ATP6V1HQ9UI12 483 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 FBXL4Q9UKA2 621 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 ADAM21Q9UKJ8 722 aa15.91■□□□□ 0.14
COL7A1-202ENST00000422991 IGHV1-45A0A0A0MS14 117 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 IGHV3-20A0A0C4DH32 117 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 K7ENP7 123 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 ERAL1O75616 437 aaKnown RBP15.9■□□□□ 0.14
COL7A1-202ENST00000422991 SLC35E2P0CK97 266 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 CPMP14384 443 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 STT3AP46977 705 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 MRPL19P49406 292 aaKnown RBP15.9■□□□□ 0.14
COL7A1-202ENST00000422991 XKP51811 444 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 ZNF750Q32MQ0 723 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 PDCD4Q53EL6 469 aaKnown RBP15.9■□□□□ 0.14
COL7A1-202ENST00000422991 ZNF385BQ569K4 471 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 ANKRD26P1Q6NSI1 321 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 INO80CQ6PI98 192 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-202ENST00000422991 SPATA21Q7Z572 469 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 R3HCC1LQ7Z5L2 792 aaKnown RBP15.9■□□□□ 0.14
COL7A1-202ENST00000422991 ST13P4Q8IZP2 240 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-202ENST00000422991 THAP4Q8WY91 577 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 PPCDCQ96CD2 204 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 VPS50Q96JG6 964 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 RILPQ96NA2 401 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 PELOQ9BRX2 385 aaKnown RBP15.9■□□□□ 0.14
COL7A1-202ENST00000422991 DPY30Q9C005 99 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 FAM107BQ9H098 131 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 SLC35C2Q9NQQ7 365 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 SDR39U1Q9NRG7 319 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-202ENST00000422991 GIMAP4Q9NUV9 329 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 G3BP2Q9UN86 482 aaKnown RBP15.9■□□□□ 0.14
COL7A1-202ENST00000422991 MAPRE3Q9UPY8 281 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 ZNF780BQ9Y6R6 833 aa15.9■□□□□ 0.14
COL7A1-202ENST00000422991 MGAQ8IWI9 3026 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 LOC400499M0QZD8 3231 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 SAGE2PA6NJ88 616 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 GABRR3A8MPY1 467 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 PEX12O00623 359 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 SEC24DO94855 1032 aaPredicted RBP15.89■□□□□ 0.13
COL7A1-202ENST00000422991 HPP00738 406 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 IFNA16P05015 189 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 COX7A2P14406 83 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 PORP16435 677 aaPredicted RBP15.89■□□□□ 0.13
COL7A1-202ENST00000422991 CSNK2A2P19784 350 aaPredicted RBP15.89■□□□□ 0.13
COL7A1-202ENST00000422991 FEN1P39748 380 aaKnown RBP15.89■□□□□ 0.13
COL7A1-202ENST00000422991 CLNS1AP54105 237 aaKnown RBP15.89■□□□□ 0.13
COL7A1-202ENST00000422991 NME5P56597 212 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 UFM1P61960 85 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 DUSP2Q05923 314 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 VAC14Q08AM6 782 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 TERF2Q15554 542 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 ELAVL1Q15717 326 aaKnown RBP15.89■□□□□ 0.13
COL7A1-202ENST00000422991 CEBPEQ15744 281 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 FAM180BQ6P0A1 224 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 PAPD4Q6PIY7 484 aaKnown RBP15.89■□□□□ 0.13
COL7A1-202ENST00000422991 NDUFAF7Q7L592 441 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 CAMKMTQ7Z624 323 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 CPLX4Q7Z7G2 160 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 SAMD14Q8IZD0 417 aaPredicted RBP15.89■□□□□ 0.13
COL7A1-202ENST00000422991 OR7A2PQ8NGA2 310 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 NUDT8Q8WV74 236 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 TEX37Q96LM6 180 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 DGAT2Q96PD7 388 aa15.89■□□□□ 0.13
COL7A1-202ENST00000422991 ELAC2Q9BQ52 826 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms