RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 NDUFS3O75489 264 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 TGM6O95932 706 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 GAS8O95995 478 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 ESR1P03372 595 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 ADRA1DP25100 572 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 HNRNPFP52597 415 aaKnown RBP8.13□□□□□ -1.11
TRIM39-206ENST00000420746 RAB8AP61006 207 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 MYL5Q02045 173 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 CDH17Q12864 832 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 FAPQ12884 760 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 RPS6KA2Q15349 733 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 NFKBIBQ15653 356 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 OCLNQ16625 522 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 TTLL9Q3SXZ7 439 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 ANKRD34AQ69YU3 496 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 SHISA2Q6UWI4 295 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 KIAA1328Q86T90 577 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 C9orf40Q8IXQ3 194 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 TMEM52Q8NDY8 209 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 TRPV3Q8NET8 790 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 RAB3IL1Q8TBN0 382 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 C10orf105Q8TEF2 133 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 ATL1Q8WXF7 558 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 DIO2Q92813 273 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 TP53INP1Q96A56 240 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 MSI2Q96DH6 328 aaKnown RBP8.13□□□□□ -1.11
TRIM39-206ENST00000420746 ZNF778Q96MU6 729 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 RILPQ96NA2 401 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 HAUS8Q9BT25 410 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 KLHL4Q9C0H6 718 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 FAIMQ9NVQ4 179 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 PIH1D1Q9NWS0 290 aaKnown RBP8.13□□□□□ -1.11
TRIM39-206ENST00000420746 KLHL42Q9P2K6 505 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 DTX4Q9Y2E6 619 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 BOLA1Q9Y3E2 137 aa8.13□□□□□ -1.11
TRIM39-206ENST00000420746 MALRD1Q5VYJ5 2156 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 WNK1Q9H4A3 2382 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 CAPN14A8MX76 684 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 CYR61O00622 381 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 NIPSNAP2O75323 286 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 VENTXO95231 258 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 CD8AP01732 235 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 IGKV3-11P04433 115 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 SERPIND1P05546 499 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 CD3EP07766 207 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 SERPINA6P08185 405 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 TMEM253P0C7T8 217 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 MPC1LP0DKB6 136 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 RBP3P10745 1247 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 ENO3P13929 434 aaPredicted RBP8.12□□□□□ -1.11
TRIM39-206ENST00000420746 LHX2P50458 406 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 SRYQ05066 204 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 RCN2Q14257 317 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 EFTUD2Q15029 972 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRIM39-206ENST00000420746 TOMM20Q15388 145 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 CR1LQ2VPA4 569 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 NCMAPQ5T1S8 102 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 TIGD3Q6B0B8 471 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 P4HA3Q7Z4N8 544 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 CLNKQ7Z7G1 428 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 GPSM1Q86YR5 675 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 CILP2Q8IUL8 1156 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 CCDC50Q8IVM0 306 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 MCUQ8NE86 351 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 ACTL9Q8TC94 416 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 SPPL2AQ8TCT8 520 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 SREK1Q8WXA9 508 aaKnown RBP8.12□□□□□ -1.11
TRIM39-206ENST00000420746 FAM168AQ92567 244 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 LPGAT1Q92604 370 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 RUNDC3BQ96NL0 473 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 ZNF747Q9BV97 191 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 ALOXE3Q9BYJ1 711 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 FANCFQ9NPI8 374 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRIM39-206ENST00000420746 WWOXQ9NZC7 414 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 WHRNQ9P202 907 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 AMFRQ9UKV5 643 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 TCAF1Q9Y4C2 921 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 MED12Q93074 2177 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 MED12LQ86YW9 2145 aa8.12□□□□□ -1.11
TRIM39-206ENST00000420746 A0A088AWK7 358 aa8.11□□□□□ -1.11
TRIM39-206ENST00000420746 SLC22A20A6NK97 555 aa8.11□□□□□ -1.11
TRIM39-206ENST00000420746 ERI2A8K979 691 aaKnown RBP8.11□□□□□ -1.11
TRIM39-206ENST00000420746 C4orf51C9J302 202 aa8.11□□□□□ -1.11
TRIM39-206ENST00000420746 PFDN6O15212 129 aa8.11□□□□□ -1.11
TRIM39-206ENST00000420746 LRATO95237 230 aa8.11□□□□□ -1.11
TRIM39-206ENST00000420746 ETHE1O95571 254 aa8.11□□□□□ -1.11
TRIM39-206ENST00000420746 ALDOAP04075 364 aaKnown RBP8.11□□□□□ -1.11
TRIM39-206ENST00000420746 CCDC166P0CW27 439 aa8.11□□□□□ -1.11
TRIM39-206ENST00000420746 NPPBP16860 134 aa8.11□□□□□ -1.11
TRIM39-206ENST00000420746 ZNF708P17019 499 aa8.11□□□□□ -1.11
TRIM39-206ENST00000420746 TNNI3P19429 210 aa8.11□□□□□ -1.11
TRIM39-206ENST00000420746 ZNF10P21506 573 aaPredicted RBP8.11□□□□□ -1.11
TRIM39-206ENST00000420746 DPP4P27487 766 aa8.11□□□□□ -1.11
TRIM39-206ENST00000420746 MSH2P43246 934 aa8.11□□□□□ -1.11
TRIM39-206ENST00000420746 GFRA1P56159 465 aa8.11□□□□□ -1.11
TRIM39-206ENST00000420746 RPP38P78345 283 aaKnown RBP8.11□□□□□ -1.11
TRIM39-206ENST00000420746 RUNX2Q13950 521 aa8.11□□□□□ -1.11
TRIM39-206ENST00000420746 GUSBP1Q15486 140 aa8.11□□□□□ -1.11
TRIM39-206ENST00000420746 BCL2A1Q16548 175 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms