RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 SLC9B2Q86UD5 537 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 C17orf64Q86WR6 236 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 CPA6Q8N4T0 437 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 KIAA1958Q8N8K9 716 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 FAM46DQ8NEK8 389 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 SLC7A13Q8TCU3 470 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 PRRG3Q9BZD7 231 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 MMP28Q9H239 520 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 PLCXD1Q9NUJ7 323 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 DOCK9Q9BZ29 2069 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 ZAR1LA6NP61 321 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 PLD2O14939 933 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 MYL12BO14950 172 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 TMPRSS11DO60235 418 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 MOSPD3O75425 235 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 CDRT1O95170 752 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 ELAVL4P26378 380 aaKnown RBP11.29□□□□□ -0.6
LIMK1-202ENST00000418310 CASP3P42574 277 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 ZNF91Q05481 1191 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 DHCR24Q15392 516 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 ZNF181Q2M3W8 571 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 C22orf42Q6IC83 251 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 TYW3Q6IPR3 259 aaKnown RBP11.29□□□□□ -0.6
LIMK1-202ENST00000418310 CAMKMTQ7Z624 323 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 IQCHQ86VS3 1027 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 MINDY2Q8NBR6 621 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 ITPKCQ96DU7 683 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 PHOX2BQ99453 314 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 SLC30A2Q9BRI3 323 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 LGR4Q9BXB1 951 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 BARHL1Q9BZE3 327 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 ZDHHC5Q9C0B5 715 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 SMURF1Q9HCE7 757 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 HHATLQ9HCP6 504 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 MYNNQ9NPC7 610 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.29□□□□□ -0.6
LIMK1-202ENST00000418310 WDR37Q9Y2I8 494 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 PEX16Q9Y5Y5 336 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 SLC35F4A4IF30 521 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 QSOX1O00391 747 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 H1F0P07305 194 aaKnown RBP11.29□□□□□ -0.6
LIMK1-202ENST00000418310 UGT2B10P36537 528 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 DCDC1P59894 354 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 UBE3AQ05086 875 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 RBBP4Q09028 425 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 SPHARQ15513 63 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 ARHGAP15Q53QZ3 475 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 ZNF367Q7RTV3 350 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 DTX3Q8N9I9 347 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 C7orf57Q8NEG2 295 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 SPATA9Q9BWV2 254 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 ZCCHC3Q9NUD5 404 aaKnown RBP11.29□□□□□ -0.6
LIMK1-202ENST00000418310 EYSQ5T1H1 3165 aa11.29□□□□□ -0.6
LIMK1-202ENST00000418310 SERTM1A2A2V5 107 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 PRKYO43930 277 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 CEBPBP17676 345 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 UQCRC2P22695 453 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 OR2B6P58173 313 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 DEFA1P59665 94 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 DEFA3P59666 94 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 OLR1P78380 273 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 LASP1Q14847 261 aaKnown RBP11.28□□□□□ -0.6
LIMK1-202ENST00000418310 LRRC26Q2I0M4 334 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 CRB2Q5IJ48 1285 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 ATAT1Q5SQI0 421 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 B3GLCTQ6Y288 498 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 USP30Q70CQ3 517 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 ATCAYQ86WG3 371 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 TP63Q9H3D4 680 aaPredicted RBP11.28□□□□□ -0.6
LIMK1-202ENST00000418310 TMEM38AQ9H6F2 299 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 THSD1Q9NS62 852 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 IMP3Q9NV31 184 aaKnown RBP11.28□□□□□ -0.6
LIMK1-202ENST00000418310 FBXL12Q9NXK8 326 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 SPATA7Q9P0W8 599 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 OR1A2Q9Y585 309 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 SPIN1Q9Y657 262 aaPredicted RBP11.28□□□□□ -0.6
LIMK1-202ENST00000418310 SCN3AQ9NY46 2000 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 SPEGQ15772 3267 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.28□□□□□ -0.6
LIMK1-202ENST00000418310 SAGE2PA6NJ88 616 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 SPINT1O43278 529 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 LILRB3O75022 631 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 UGT2B17O75795 530 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 CYP17A1P05093 508 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 KRT8P05787 483 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 HBQ1P09105 142 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 CD72P21854 359 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 CCT3P49368 545 aaKnown RBP11.28□□□□□ -0.6
LIMK1-202ENST00000418310 CLCNKAP51800 687 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 PCBP3P57721 371 aaKnown RBP11.28□□□□□ -0.6
LIMK1-202ENST00000418310 MRPS15P82914 257 aaKnown RBP11.28□□□□□ -0.6
LIMK1-202ENST00000418310 GPR19Q15760 415 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 BAK1Q16611 211 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 FAM214AQ32MH5 1076 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 C1QTNF12Q5T7M4 302 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 LILRA6Q6PI73 481 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 MAPKAP1Q9BPZ7 522 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 OR51I1Q9H343 314 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 EGLN3Q9H6Z9 239 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 CPNE5Q9HCH3 593 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms