RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SYTL2Q9HCH5 934 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 SNX15Q9NRS6 342 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 TXLNGQ9NUQ3 528 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 FAM30AQ9NZY2 134 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 XPR1Q9UBH6 696 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 SERTAD3Q9UJW9 196 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 MRPS2Q9Y399 296 aaKnown RBP4.63□□□□□ -1.67
VPS41-205ENST00000414632 MAU2Q9Y6X3 613 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.63□□□□□ -1.67
VPS41-205ENST00000414632 GCN1Q92616 2671 aaKnown RBP4.63□□□□□ -1.67
VPS41-205ENST00000414632 MED13Q9UHV7 2174 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 TENM4Q6N022 2769 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 PRRC2CQ9Y520 2896 aaKnown RBP4.62□□□□□ -1.67
VPS41-205ENST00000414632 A0A087WUV0 522 aaPredicted RBP4.62□□□□□ -1.67
VPS41-205ENST00000414632 A0A096LPK6 155 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 A0A1B0GVC2 190 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 EXOC1LA0A1B0GW35 172 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 HYKKA2RU49 373 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 OR2A25A4D2G3 310 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 SH3D21A4FU49 640 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 CDHR4A6H8M9 788 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 ARGFXA6NJG6 315 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 SMIM23A6NLE4 172 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 FOXO6A8MYZ6 492 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 SUPT3HB4E1H0 165 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 TRIM49D1C9J1S8 452 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 UBXN8O00124 270 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 TAPBPO15533 448 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 RIPK2O43353 540 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 LCMT2O60294 686 aaKnown RBP4.62□□□□□ -1.67
VPS41-205ENST00000414632 CNOT3O75175 753 aaKnown RBP4.62□□□□□ -1.67
VPS41-205ENST00000414632 ALOX12BO75342 701 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 SUPT3HO75486 399 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 CREG1O75629 220 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 WDR47O94967 919 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 CCNDBP1O95273 360 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 C2P06681 752 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 KLK3P07288 261 aaPredicted RBP4.62□□□□□ -1.67
VPS41-205ENST00000414632 CAPN1P07384 714 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 INHBAP08476 426 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 ANXA5P08758 320 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 SLC35E2BP0CK96 405 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 NPPBP16860 134 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 TFEBP19484 476 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 PI3P19957 117 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 SLC6A2P23975 617 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 OTX2P32243 289 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 HSD17B2P37059 387 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 MSH2P43246 934 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 KCNC1P48547 511 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 AGTR2P50052 363 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 SERPINB8P50452 374 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 PMS2P54278 862 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 RPS15P62841 145 aaKnown RBP4.62□□□□□ -1.67
VPS41-205ENST00000414632 CSNK1G2P78368 415 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 CDC20Q12834 499 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 NAB1Q13506 487 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 RIN1Q13671 783 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 SLC29A2Q14542 456 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 ZKSCAN8Q15776 578 aaPredicted RBP4.62□□□□□ -1.67
VPS41-205ENST00000414632 SYT16Q17RD7 645 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 LINC00303Q3SY05 128 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 SOWAHCQ53LP3 525 aaPredicted RBP4.62□□□□□ -1.67
VPS41-205ENST00000414632 ZNF425Q6IV72 752 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 CAPN13Q6MZZ7 669 aaPredicted RBP4.62□□□□□ -1.67
VPS41-205ENST00000414632 RHBDD2Q6NTF9 364 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 LCTLQ6UWM7 567 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 TMPRSS11BQ86T26 416 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 ADAMTSL2Q86TH1 951 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 TBC1D1Q86TI0 1168 aaPredicted RBP4.62□□□□□ -1.67
VPS41-205ENST00000414632 THOC6Q86W42 341 aaKnown RBP4.62□□□□□ -1.67
VPS41-205ENST00000414632 C17orf64Q86WR6 236 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 GPSM1Q86YR5 675 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 PRSS58Q8IYP2 241 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 CENPLQ8N0S6 344 aaPredicted RBP4.62□□□□□ -1.67
VPS41-205ENST00000414632 CSNK1A1LQ8N752 337 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 AMER2Q8N7J2 671 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 ZNF740Q8NDX6 193 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 OR8K5Q8NH50 307 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 TBC1D15Q8TC07 691 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 STT3BQ8TCJ2 826 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 ADAMTS17Q8TE56 1095 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 NEIL2Q969S2 332 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 ZUFSPQ96AP4 578 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 FBXL8Q96CD0 374 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 NXNL1Q96CM4 212 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 MOCOSQ96EN8 888 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 PDLIM5Q96HC4 596 aaKnown RBP4.62□□□□□ -1.67
VPS41-205ENST00000414632 SLC45A3Q96JT2 553 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 CABS1Q96KC9 395 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 C10orf90Q96M02 699 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 GBP5Q96PP8 586 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 OR4K3Q96R72 315 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 KRTAP4-12Q9BQ66 201 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 MESP1Q9BRJ9 268 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 TMEM79Q9BSE2 394 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 SPATA5L1Q9BVQ7 753 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 DERL2Q9GZP9 239 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 ANKZF1Q9H8Y5 726 aa4.62□□□□□ -1.67
VPS41-205ENST00000414632 POPDC3Q9HBV1 291 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms