RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 C9orf106Q8NAJ2 232 aa4.09□□□□□ -1.75
HMGB3P31-201ENST00000413333 MINDY2Q8NBR6 621 aa4.09□□□□□ -1.75
HMGB3P31-201ENST00000413333 GOLGA5Q8TBA6 731 aa4.09□□□□□ -1.75
HMGB3P31-201ENST00000413333 TMEM37Q8WXS4 190 aa4.09□□□□□ -1.75
HMGB3P31-201ENST00000413333 P3H4Q92791 437 aa4.09□□□□□ -1.75
HMGB3P31-201ENST00000413333 LRR1Q96L50 414 aa4.09□□□□□ -1.75
HMGB3P31-201ENST00000413333 PGLYRP2Q96PD5 576 aa4.09□□□□□ -1.75
HMGB3P31-201ENST00000413333 PINK1Q9BXM7 581 aa4.09□□□□□ -1.75
HMGB3P31-201ENST00000413333 NLNQ9BYT8 704 aa4.09□□□□□ -1.75
HMGB3P31-201ENST00000413333 ECT2Q9H8V3 914 aa4.09□□□□□ -1.75
HMGB3P31-201ENST00000413333 SLC25A19Q9HC21 320 aa4.09□□□□□ -1.75
HMGB3P31-201ENST00000413333 C2orf42Q9NWW7 574 aa4.09□□□□□ -1.75
HMGB3P31-201ENST00000413333 BCAP29Q9UHQ4 241 aa4.09□□□□□ -1.75
HMGB3P31-201ENST00000413333 MGAT4BQ9UQ53 548 aa4.09□□□□□ -1.75
HMGB3P31-201ENST00000413333 MEIOCA2RUB1 952 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 NEDD8-MDP1E9PL57 170 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 LGALS8O00214 317 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 INPP4BO15327 924 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 TLX2O43763 284 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 MTRF1O75570 445 aaKnown RBP4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZMYM6O95789 1325 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 TSPY4P0CV99 314 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 TSPY10P0CW01 314 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 AOC1P19801 751 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 PAICSP22234 425 aaKnown RBP4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 PDHA2P29803 388 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 MDH1P40925 334 aaKnown RBP4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 MTIF2P46199 727 aaKnown RBP4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 SLC6A8P48029 635 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 CDKL1Q00532 357 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 PDZK1IP1Q13113 114 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 RAPSNQ13702 412 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 KLF5Q13887 457 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 NCAPD2Q15021 1401 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 TAF7Q15545 349 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 TCHHL1Q5QJ38 904 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 RUSC1-AS1Q66K80 236 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 ARHGAP17Q68EM7 881 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 STEAP1BQ6NZ63 245 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 TRIM65Q6PJ69 517 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 ARSKQ6UWY0 536 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 CWC27Q6UX04 472 aaKnown RBP4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 C18orf65Q6ZTR6 163 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 ERASQ7Z444 233 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 SLC22A16Q86VW1 577 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 AMZ2Q86W34 360 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 MISPQ8IVT2 679 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 OR4N5Q8IXE1 308 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 BCORP1Q8N888 145 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 MLKLQ8NB16 471 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 COLGALT1Q8NBJ5 622 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF519Q8TB69 540 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 RDH11Q8TC12 318 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF300Q96RE9 604 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 KRT12Q99456 494 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 SYT15Q9BQS2 421 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 GTSE1Q9NYZ3 720 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 MIOXQ9UGB7 285 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 KIF3AQ9Y496 699 aa4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.08□□□□□ -1.76
HMGB3P31-201ENST00000413333 A0A087WZY1 265 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 IQCMA0A1B0GVH7 501 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 FAM230AA0A1W2PPH8 454 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 MEI4A8MW99 385 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 TNFSF12O43508 249 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 VPS26AO75436 327 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 CSDE1O75534 798 aaKnown RBP4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 CEACAM4O75871 244 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 CA3P07451 260 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 RRASP10301 218 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 MYOGP15173 224 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 CYP11B1P15538 503 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 CD1DP15813 335 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 ANOS1P23352 680 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 ACAA2P42765 397 aaKnown RBP4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 HSF2Q03933 536 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF528Q3MIS6 628 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 C1orf189Q5VU69 101 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 TBC1D10CQ8IV04 446 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 KLHDC8BQ8IXV7 354 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 CERS5Q8N5B7 392 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 ICA1LQ8NDH6 482 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF540Q8NDQ6 660 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 OR52B6Q8NGF0 335 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 ACCSQ96QU6 501 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 USP28Q96RU2 1077 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 DCTN5Q9BTE1 182 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 MED20Q9H944 212 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 PALMDQ9NP74 551 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 TMOD2Q9NZR1 351 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 CACNG5Q9UF02 275 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 ERRFI1Q9UJM3 462 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 SLC6A5Q9Y345 797 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF175Q9Y473 711 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 RNF215Q9Y6U7 377 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 U3KQV3 271 aa4.07□□□□□ -1.76
HMGB3P31-201ENST00000413333 LOC390937A0A1W2PQ73 354 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 EME2A4GXA9 379 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 ANKRD30BLA7E2S9 258 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 PRSS44E7EML9 344 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms