RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 HIPK4Q8NE63 616 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 OR2T12Q8NG77 320 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 OR4K14Q8NGD5 310 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 OR52N2Q8NGI0 321 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 PNPT1Q8TCS8 783 aaKnown RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 ATOH1Q92858 354 aaPredicted RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 STMN2Q93045 179 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 FAM120BQ96EK7 910 aaKnown RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 MMABQ96EY8 250 aaPredicted RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 REXO5Q96IC2 774 aaKnown RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 ZNF681Q96N22 645 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 ZNF583Q96ND8 569 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 BBS4Q96RK4 519 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 ECSITQ9BQ95 431 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 DPH2Q9BQC3 489 aaPredicted RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 NDC1Q9BTX1 674 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 RBCK1Q9BYM8 510 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 TRIM15Q9C019 465 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 PIF1Q9H611 641 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 EPS8L2Q9H6S3 715 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 CLK4Q9HAZ1 481 aaKnown RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 FAM86C1Q9NVL1 165 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 ACTR3BQ9P1U1 418 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 NCDNQ9UBB6 729 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 DHCR7Q9UBM7 475 aaKnown RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 EGFL7Q9UHF1 273 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 MAGEL2Q9UJ55 1249 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 SERTAD3Q9UJW9 196 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 PSME2Q9UL46 239 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 SRPK3Q9UPE1 567 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 CLCA2Q9UQC9 943 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 TMEM184BQ9Y519 407 aaPredicted RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 PCDHB3Q9Y5E6 796 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 SNX13Q9Y5W8 968 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 SNX8Q9Y5X2 465 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 ZNF780BQ9Y6R6 833 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 FRYLO94915 3013 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 NUP210LQ5VU65 1888 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 TCRBV3S1A0A5B6 114 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 ELOVL7A1L3X0 281 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 BLACEA4D250 179 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 FAM227AF5H4B4 570 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 B4GALT2O60909 372 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 LDB3O75112 727 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 TIAF1O95411 115 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 PSMG1O95456 288 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 STAMBPO95630 424 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 KRT75O95678 551 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 LMNAP02545 664 aaKnown RBP6.25□□□□□ -1.41
VPS41-204ENST00000413141 NTRK1P04629 796 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 ATP1B1P05026 303 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 C8BP07358 591 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 CPMP14384 443 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 NCK1P16333 377 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 GGT1P19440 569 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 FBLP22087 321 aaKnown RBP6.25□□□□□ -1.41
VPS41-204ENST00000413141 TGM1P22735 817 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 PPP2R1BP30154 601 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 CCKBRP32239 447 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 MPIP34949 423 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 PTGER1P34995 402 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 GPC1P35052 558 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 SOX11P35716 441 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 CHI3L1P36222 383 aaPredicted RBP6.25□□□□□ -1.41
VPS41-204ENST00000413141 FEN1P39748 380 aaKnown RBP6.25□□□□□ -1.41
VPS41-204ENST00000413141 MC3RP41968 323 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 XCR1P46094 333 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 XKP51811 444 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 ARSFP54793 590 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 MRPS22P82650 360 aaKnown RBP6.25□□□□□ -1.41
VPS41-204ENST00000413141 ID2Q02363 134 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 FADDQ13158 208 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 C16orf72Q14CZ0 275 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 RCN1Q15293 331 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 RGNQ15493 299 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 LTB4RQ15722 352 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 CYP51A1Q16850 503 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 SPDYE7PQ495Y7 208 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 AASDHQ4L235 1098 aaPredicted RBP6.25□□□□□ -1.41
VPS41-204ENST00000413141 COX20Q5RI15 118 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS41-204ENST00000413141 CPZQ66K79 652 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 ERICH5Q6P6B1 374 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 TMEM107Q6UX40 140 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 ANGPTL8Q6UXH0 198 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 CYP2R1Q6VVX0 501 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 RBM44Q6ZP01 1051 aaKnown RBP6.25□□□□□ -1.41
VPS41-204ENST00000413141 DHFR2Q86XF0 187 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 RNF130Q86XS8 419 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 PTOV1Q86YD1 416 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 OR4N5Q8IXE1 308 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 ZNF595Q8IYB9 648 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 ZZZ3Q8IYH5 903 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 MICU2Q8IYU8 434 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 CCDC116Q8IYX3 515 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 TNIP2Q8NFZ5 429 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 OR9A2Q8NGT5 310 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 SFXN5Q8TD22 340 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 SLC26A7Q8TE54 656 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 TANKQ92844 425 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms