RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 GPR85P60893 370 aa17.67■□□□□ 0.42
SF3A1-202ENST00000411423 VSNL1P62760 191 aa17.67■□□□□ 0.42
SF3A1-202ENST00000411423 HSF1Q00613 529 aa17.67■□□□□ 0.42
SF3A1-202ENST00000411423 ZNF750Q32MQ0 723 aa17.67■□□□□ 0.42
SF3A1-202ENST00000411423 IL20RBQ6UXL0 311 aa17.67■□□□□ 0.42
SF3A1-202ENST00000411423 COMMD6Q7Z4G1 85 aa17.67■□□□□ 0.42
SF3A1-202ENST00000411423 FGD2Q7Z6J4 655 aa17.67■□□□□ 0.42
SF3A1-202ENST00000411423 LCA5Q86VQ0 697 aa17.67■□□□□ 0.42
SF3A1-202ENST00000411423 TMEM156Q8N614 296 aa17.67■□□□□ 0.42
SF3A1-202ENST00000411423 CDYL2Q8N8U2 506 aa17.67■□□□□ 0.42
SF3A1-202ENST00000411423 MYRIPQ8NFW9 859 aa17.67■□□□□ 0.42
SF3A1-202ENST00000411423 SELENOMQ8WWX9 145 aa17.67■□□□□ 0.42
SF3A1-202ENST00000411423 GSTO2Q9H4Y5 243 aa17.67■□□□□ 0.42
SF3A1-202ENST00000411423 ELOVL6Q9H5J4 265 aa17.67■□□□□ 0.42
SF3A1-202ENST00000411423 SLC12A4Q9UP95 1085 aa17.67■□□□□ 0.42
SF3A1-202ENST00000411423 SPTAN1Q13813 2472 aaKnown RBP17.67■□□□□ 0.42
SF3A1-202ENST00000411423 MANBAO00462 879 aa17.66■□□□□ 0.42
SF3A1-202ENST00000411423 UBFD1O14562 309 aaKnown RBP17.66■□□□□ 0.42
SF3A1-202ENST00000411423 ZG16O60844 167 aa17.66■□□□□ 0.42
SF3A1-202ENST00000411423 NADKO95544 446 aaPredicted RBP17.66■□□□□ 0.42
SF3A1-202ENST00000411423 PROCP04070 461 aa17.66■□□□□ 0.42
SF3A1-202ENST00000411423 GSTA1P08263 222 aa17.66■□□□□ 0.42
SF3A1-202ENST00000411423 CT62P0C5K7 136 aa17.66■□□□□ 0.42
SF3A1-202ENST00000411423 TLX1P31314 330 aaPredicted RBP17.66■□□□□ 0.42
SF3A1-202ENST00000411423 ERVK-8P63133 956 aa17.66■□□□□ 0.42
SF3A1-202ENST00000411423 LYPD8Q6UX82 237 aa17.66■□□□□ 0.42
SF3A1-202ENST00000411423 TDRPQ86YL5 185 aa17.66■□□□□ 0.42
SF3A1-202ENST00000411423 ST13P4Q8IZP2 240 aaPredicted RBP17.66■□□□□ 0.42
SF3A1-202ENST00000411423 OR8K3Q8NH51 312 aa17.66■□□□□ 0.42
SF3A1-202ENST00000411423 OR2W6PQ8NHA6 318 aa17.66■□□□□ 0.42
SF3A1-202ENST00000411423 RELTQ969Z4 430 aa17.66■□□□□ 0.42
SF3A1-202ENST00000411423 L3HYPDHQ96EM0 354 aa17.66■□□□□ 0.42
SF3A1-202ENST00000411423 KCNA7Q96RP8 456 aa17.66■□□□□ 0.42
SF3A1-202ENST00000411423 ZNF382Q96SR6 550 aa17.66■□□□□ 0.42
SF3A1-202ENST00000411423 ERVK-19Q9WJR5 959 aa17.66■□□□□ 0.42
SF3A1-202ENST00000411423 DOPEY1Q5JWR5 2465 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 PEX1O43933 1283 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 FOXA1P55317 472 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 PLIN5Q00G26 463 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 DUSP2Q05923 314 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 C3AR1Q16581 482 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 SPRED3Q2MJR0 410 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 NDUFAF5Q5TEU4 345 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 ASB15Q8WXK1 588 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 TMEM125Q96AQ2 219 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 FBXL20Q96IG2 436 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 TNFRSF12AQ9NP84 129 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 SH3BGRL2Q9UJC5 107 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 ADAM29Q9UKF5 820 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 CES1P1Q9UKY3 287 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 SNX6Q9UNH7 406 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 ZNF835Q9Y2P0 537 aa17.65■□□□□ 0.42
SF3A1-202ENST00000411423 KLF13Q9Y2Y9 288 aaPredicted RBP17.65■□□□□ 0.42
SF3A1-202ENST00000411423 TRGV8A0A0C4DH27 118 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 A8MVJ9 347 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 G3V3Y1 287 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 ASNA1O43681 348 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 PTGER1P34995 402 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 SOX18P35713 384 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 ASPHQ12797 758 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 ZNF267Q14586 743 aaPredicted RBP17.64■□□□□ 0.41
SF3A1-202ENST00000411423 CCNYL2Q5T2Q4 361 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 C10orf62Q5T681 223 aaPredicted RBP17.64■□□□□ 0.41
SF3A1-202ENST00000411423 OR52E8Q6IFG1 317 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 SCIMPQ6UWF3 145 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 ZYG11AQ6WRX3 759 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 GPRIN3Q6ZVF9 776 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 C1orf52Q8N6N3 182 aaKnown RBP17.64■□□□□ 0.41
SF3A1-202ENST00000411423 FAM98AQ8NCA5 519 aaKnown RBP17.64■□□□□ 0.41
SF3A1-202ENST00000411423 PSD4Q8NDX1 1056 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 TM4SF18Q96CE8 201 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 RBM18Q96H35 190 aaKnown RBP17.64■□□□□ 0.41
SF3A1-202ENST00000411423 CNPPD1Q9BV87 410 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 BRF2Q9HAW0 419 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 HPF1Q9NWY4 346 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 DCDC2Q9UHG0 476 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 TINAGQ9UJW2 476 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 TIMM22Q9Y584 194 aa17.64■□□□□ 0.41
SF3A1-202ENST00000411423 PLIN3O60664 434 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 SLC19A2O60779 497 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 GLRA3O75311 464 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 SLC35E2P0CK97 266 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 COX7A2P14406 83 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 ZNF24P17028 368 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 SSTR4P31391 388 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 CA7P43166 264 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 SLC37A1P57057 533 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 RAE1P78406 368 aaKnown RBP17.63■□□□□ 0.41
SF3A1-202ENST00000411423 RASA2Q15283 850 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 PIGGQ5H8A4 983 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 FAM180BQ6P0A1 224 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 NCCRP1Q6ZVX7 275 aaPredicted RBP17.63■□□□□ 0.41
SF3A1-202ENST00000411423 MAMDC2Q7Z304 686 aaPredicted RBP17.63■□□□□ 0.41
SF3A1-202ENST00000411423 SLC22A9Q8IVM8 553 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 C4orf33Q8N1A6 199 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 ZFP62Q8NB50 900 aaPredicted RBP17.63■□□□□ 0.41
SF3A1-202ENST00000411423 C16orf52Q8NHV5 167 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 NUBPLQ8TB37 319 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 AGAP11Q8TF27 550 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 CHTF18Q8WVB6 975 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms