RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 PLEKHM1Q9Y4G2 1056 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 ENTPD2Q9Y5L3 495 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 CORINQ9Y5Q5 1042 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 LAMA2P24043 3122 aaKnown RBP7.1□□□□□ -1.27
CXCR4-202ENST00000409817 A6NCN8 305 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 TMEM247A6NEH6 219 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 URADA6NGE7 173 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 ZNF701M0R085 212 aaPredicted RBP7.1□□□□□ -1.27
CXCR4-202ENST00000409817 RTCAO00442 366 aaKnown RBP7.1□□□□□ -1.27
CXCR4-202ENST00000409817 OIP5O43482 229 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 TMPRSS11DO60235 418 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 HS6ST1O60243 411 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 JRKO75564 520 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 C9P02748 559 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 ETFAP13804 333 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 HOXB4P17483 251 aaPredicted RBP7.1□□□□□ -1.27
CXCR4-202ENST00000409817 EFNA1P20827 205 aaPredicted RBP7.1□□□□□ -1.27
CXCR4-202ENST00000409817 HIST1H1TP22492 207 aaPredicted RBP7.1□□□□□ -1.27
CXCR4-202ENST00000409817 IGFBP5P24593 272 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 NTSP30990 170 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 BCL6P41182 706 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 ACTR1BP42025 376 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 HLCSP50747 726 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 PCBP3P57721 371 aaKnown RBP7.1□□□□□ -1.27
CXCR4-202ENST00000409817 CLDN2P57739 230 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 GABARAPL2P60520 117 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 ACTR1AP61163 376 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 KCNJ10P78508 379 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 VLDLRP98155 873 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 RGS1Q08116 209 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 KEAP1Q14145 624 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 CNPY1Q3B7I2 92 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 KDM4DQ6B0I6 523 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 MRM1Q6IN84 353 aaKnown RBP7.1□□□□□ -1.27
CXCR4-202ENST00000409817 REEP3Q6NUK4 255 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 ABHD17CQ6PCB6 329 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 TMEM64Q6YI46 380 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 RNF130Q86XS8 419 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 WFDC8Q8IUA0 241 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 PIK3C3Q8NEB9 887 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 GEMIN6Q8WXD5 167 aaKnown RBP7.1□□□□□ -1.27
CXCR4-202ENST00000409817 MS4A6EQ96DS6 147 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 MUS81Q96NY9 551 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 DEPDC7Q96QD5 511 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 MYOCQ99972 504 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 PHF7Q9BWX1 381 aaPredicted RBP7.1□□□□□ -1.27
CXCR4-202ENST00000409817 SORBS1Q9BX66 1292 aaKnown RBP7.1□□□□□ -1.27
CXCR4-202ENST00000409817 GSDMCQ9BYG8 508 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 RBM38Q9H0Z9 239 aaKnown RBP7.1□□□□□ -1.27
CXCR4-202ENST00000409817 SRMSQ9H3Y6 488 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 VCX3AQ9NNX9 186 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 POT1Q9NUX5 634 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 LYARQ9NX58 379 aaKnown RBP7.1□□□□□ -1.27
CXCR4-202ENST00000409817 UTS2RQ9UKP6 389 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 SAMHD1Q9Y3Z3 626 aaKnown RBP7.1□□□□□ -1.27
CXCR4-202ENST00000409817 KLK4Q9Y5K2 254 aa7.1□□□□□ -1.27
CXCR4-202ENST00000409817 KIR2DS5A0A0G2JLQ3 304 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 A0A0G2JNG1 304 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 LOC100289279A0A1B0GTE1 492 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 LOC100130705A0A1B0GUX0 176 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 ISM1B1AKI9 464 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 CHURC1-FNTBB4DL54 471 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 C5orf58C9J3I9 102 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 KIR2DS3K7RE56 304 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 HAT1O14929 419 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 ZW10O43264 779 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 ERI3O43414 337 aaKnown RBP7.09□□□□□ -1.27
CXCR4-202ENST00000409817 TNFSF14O43557 240 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 HTR3BO95264 441 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 TNFP01375 233 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 SERPIND1P05546 499 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 SRFP11831 508 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 PAX7P23759 505 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 ATP5A1P25705 553 aaKnown RBP7.09□□□□□ -1.27
CXCR4-202ENST00000409817 PEBP1P30086 187 aaKnown RBP7.09□□□□□ -1.27
CXCR4-202ENST00000409817 ALDH9A1P49189 494 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 IST1P53990 364 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 TPD52P55327 224 aaPredicted RBP7.09□□□□□ -1.27
CXCR4-202ENST00000409817 KCNAB2Q13303 367 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 GNA13Q14344 377 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 KIR2DS5Q14953 304 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 C16orf72Q14CZ0 275 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 ALG11Q2TAA5 492 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 IQCCQ4KMZ1 466 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 NDUFAF5Q5TEU4 345 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 KIAA0895LQ68EN5 471 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 CEACAM20Q6UY09 585 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 ZNF852Q6ZMS4 543 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 SYT13Q7L8C5 426 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 VTCN1Q7Z7D3 282 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 PAQR7Q86WK9 346 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 RBM12BQ8IXT5 1001 aaKnown RBP7.09□□□□□ -1.27
CXCR4-202ENST00000409817 SAMD14Q8IZD0 417 aaPredicted RBP7.09□□□□□ -1.27
CXCR4-202ENST00000409817 FBXL6Q8N531 539 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 NT5CQ8TCD5 201 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 SFXN5Q8TD22 340 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 ZFAND2BQ8WV99 257 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 MAL2Q969L2 176 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 TPD52L3Q96J77 140 aa7.09□□□□□ -1.27
CXCR4-202ENST00000409817 CNDP2Q96KP4 475 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms