RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, human

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA1-205	ENST00000409542	TRPC4AP	Q8TEL6	797 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	TSPEAR	Q8WU66	669 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	SPDL1	Q96EA4	605 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	LRGUK	Q96M69	825 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	HES7	Q9BYE0	225 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	RNF32	Q9H0A6	362 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	ZNF700	Q9H0M5	742 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	P2RY12	Q9H244	342 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	STMN3	Q9NZ72	180 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	ADA2	Q9NZK5	511 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	TMEM181	Q9P2C4	612 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	TRPC4	Q9UBN4	977 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	CD300A	Q9UGN4	299 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	PACSIN3	Q9UKS6	424 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	IKZF3	Q9UKT9	509 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	ZNF835	Q9Y2P0	537 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	NDUFAF1	Q9Y375	327 aa		11.95	□□□□□ -0.5
CHRNA1-205	ENST00000409542	OR5H15	A6NDH6	313 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	NPEPPSL1	A6NEC2	478 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	CDC7	O00311	574 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	FOXS1	O43638	330 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	C1orf105	O95561	183 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	HEXB	P07686	556 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	SSTR2	P30874	369 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	IL2	P60568	153 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	MED21	Q13503	144 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	HKDC1	Q2TB90	917 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	SPATS1	Q496A3	300 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	SAMD4B	Q5PRF9	694 aa	Known RBP	11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	MTFR2	Q6P444	385 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	TMEM205	Q6UW68	189 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	SPNS3	Q6ZMD2	512 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	NEK10	Q6ZWH5	1172 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	FUNDC1	Q8IVP5	155 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	ARHGEF39	Q8N4T4	335 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	CD200R1	Q8TD46	325 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	ASZ1	Q8WWH4	475 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	PDLIM5	Q96HC4	596 aa	Known RBP	11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	IMMP1L	Q96LU5	166 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	NSUN5	Q96P11	429 aa	Known RBP	11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	CCT7	Q99832	543 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	TUBB1	Q9H4B7	451 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	PFDN4	Q9NQP4	134 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	TMEM45A	Q9NWC5	275 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	NUDT4	Q9NZJ9	180 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	CCDC167	Q9P0B6	97 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	PCTP	Q9UKL6	214 aa		11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	RUVBL1	Q9Y265	456 aa	Known RBP	11.94	□□□□□ -0.5
CHRNA1-205	ENST00000409542	SCN2A	Q99250	2005 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	IGHV3-20	A0A0C4DH32	117 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	OR2A25	A4D2G3	310 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	DENR	O43583	198 aa	Known RBP	11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	NIPSNAP2	O75323	286 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	FKBP9	O95302	570 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	CLDN14	O95500	239 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	ESRRB	O95718	433 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	RPN2	P04844	631 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	UROS	P10746	265 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	IDO1	P14902	403 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	AGA	P20933	346 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	RPS3	P23396	243 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	CXCR2	P25025	360 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	HSPA13	P48723	471 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	MAT1A	Q00266	395 aa	Known RBP	11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	RBPJ	Q06330	500 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	ZNF33B	Q06732	778 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	GRAMD1B	Q3KR37	738 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	XKR7	Q5GH72	579 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	ZNF766	Q5HY98	468 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	PAOX	Q6QHF9	649 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542		Q6ZPB1	254 aa	Predicted RBP	11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	CDH24	Q86UP0	819 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	GPSM1	Q86YR5	675 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	LINGO1	Q96FE5	620 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	SIGLEC12	Q96PQ1	595 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	SLC30A3	Q99726	388 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	HOPX	Q9BPY8	73 aa	Predicted RBP	11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	ZFYVE21	Q9BQ24	234 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	GPATCH1	Q9BRR8	931 aa	Known RBP	11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	DPH7	Q9BTV6	452 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	ACAT2	Q9BWD1	397 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	FAM192A	Q9GZU8	254 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542		Q9H521	79 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	RIC8B	Q9NVN3	520 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	GALP	Q9UBC7	116 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	CNOT11	Q9UKZ1	510 aa	Known RBP	11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	MEMO1	Q9Y316	297 aa		11.93	□□□□□ -0.5
CHRNA1-205	ENST00000409542	GTF3C1	Q12789	2109 aa		11.92	□□□□□ -0.5
CHRNA1-205	ENST00000409542		A0A0A6YYC8	382 aa	Predicted RBP	11.92	□□□□□ -0.5
CHRNA1-205	ENST00000409542	IGKV1-8	A0A0C4DH67	115 aa		11.92	□□□□□ -0.5
CHRNA1-205	ENST00000409542	ATP6AP2	A0A1C7CYW4	349 aa		11.92	□□□□□ -0.5
CHRNA1-205	ENST00000409542	TCRBV3S1	A0A5B6	114 aa		11.92	□□□□□ -0.5
CHRNA1-205	ENST00000409542	OR2W5	A6NFC9	320 aa		11.92	□□□□□ -0.5
CHRNA1-205	ENST00000409542	FAM227A	F5H4B4	570 aa		11.92	□□□□□ -0.5
CHRNA1-205	ENST00000409542		I3L1I5	382 aa	Predicted RBP	11.92	□□□□□ -0.5
CHRNA1-205	ENST00000409542	PPP6C	O00743	305 aa		11.92	□□□□□ -0.5
CHRNA1-205	ENST00000409542	PRMT5	O14744	637 aa	Predicted RBP	11.92	□□□□□ -0.5

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