RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 GAS6Q14393 721 aa19.57■□□□□ 0.72
USP39-203ENST00000409470 UBXN2BQ14CS0 331 aa19.57■□□□□ 0.72
USP39-203ENST00000409470 RBM48Q5RL73 367 aaKnown RBP19.57■□□□□ 0.72
USP39-203ENST00000409470 ZCCHC10Q8TBK6 192 aa19.57■□□□□ 0.72
USP39-203ENST00000409470 OR51I1Q9H343 314 aa19.57■□□□□ 0.72
USP39-203ENST00000409470 HRASLS2Q9NWW9 162 aa19.57■□□□□ 0.72
USP39-203ENST00000409470 CES1P1Q9UKY3 287 aa19.57■□□□□ 0.72
USP39-203ENST00000409470 DUSP12Q9UNI6 340 aa19.57■□□□□ 0.72
USP39-203ENST00000409470 FAM32AQ9Y421 112 aaKnown RBP19.57■□□□□ 0.72
USP39-203ENST00000409470 LYVE1Q9Y5Y7 322 aa19.57■□□□□ 0.72
USP39-203ENST00000409470 SLCO1B1Q9Y6L6 691 aa19.57■□□□□ 0.72
USP39-203ENST00000409470 H3BSA7 217 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 B4GAT1O43505 415 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 SLC28A2O43868 658 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 PDE9AO76083 593 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 OR12D1P0DN82 309 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 CSNK2A2P19784 350 aaPredicted RBP19.56■□□□□ 0.72
USP39-203ENST00000409470 MATN1P21941 496 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 BLKP51451 505 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 CD47Q08722 323 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 FAHD1Q6P587 224 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 ZNF687Q8N1G0 1237 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 CHDHQ8NE62 594 aaPredicted RBP19.56■□□□□ 0.72
USP39-203ENST00000409470 XAGE5Q8WWM1 108 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 HDAC2Q92769 488 aaKnown RBP19.56■□□□□ 0.72
USP39-203ENST00000409470 TM4SF19Q96DZ7 209 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 SERHL2Q9H4I8 314 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 GPR27Q9NS67 375 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 EXD2Q9NVH0 621 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 ANKMY1Q9P2S6 941 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 P2RX2Q9UBL9 471 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 ZNF780BQ9Y6R6 833 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 TNRC18O15417 2968 aaPredicted RBP19.56■□□□□ 0.72
USP39-203ENST00000409470 IGHV1OR15-9A0A0B4J2B8 117 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 FAM221BA6H8Z2 402 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 URADA6NGE7 173 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 PRAMEF25A6NGN4 478 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 P2RX6O15547 441 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 NR2F6P10588 404 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 CDH12P55289 794 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 IL5RAQ01344 420 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 SUZ12Q15022 739 aaKnown RBP19.56■□□□□ 0.72
USP39-203ENST00000409470 DUSP7Q16829 419 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 CTU2Q2VPK5 515 aaKnown RBP19.56■□□□□ 0.72
USP39-203ENST00000409470 C6orf141Q5SZD1 244 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 BHLHB9Q6PI77 547 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 GPR141Q7Z602 305 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 PARGQ86W56 976 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 TTC29Q8NA56 475 aaPredicted RBP19.56■□□□□ 0.72
USP39-203ENST00000409470 OR5D16Q8NGK9 328 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 OR52J3Q8NH60 311 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 SUN3Q8TAQ9 357 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 ADAMTS16Q8TE57 1224 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 GIPC3Q8TF64 312 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 ROGDIQ9GZN7 287 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 DDX18Q9NVP1 670 aaKnown RBP19.56■□□□□ 0.72
USP39-203ENST00000409470 PSME2Q9UL46 239 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 CEPT1Q9Y6K0 416 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 COMMD3-BMI1R4GMX3 469 aa19.56■□□□□ 0.72
USP39-203ENST00000409470 PVRP15151 417 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 MPIP34949 423 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 KHKP50053 298 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 ISL1P61371 349 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 DUSP2Q05923 314 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 RAPSNQ13702 412 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 GPR19Q15760 415 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 TMEM107Q6UX40 140 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 TMEM64Q6YI46 380 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 ZNF761Q86XN6 746 aaPredicted RBP19.55■□□□□ 0.72
USP39-203ENST00000409470 DEFB119Q8N690 84 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 CAMKVQ8NCB2 501 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 SETD9Q8NE22 299 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 FAM46DQ8NEK8 389 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 SFXN5Q8TD22 340 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 RERGQ96A58 199 aaPredicted RBP19.55■□□□□ 0.72
USP39-203ENST00000409470 THAP11Q96EK4 314 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 ZFYVE21Q9BQ24 234 aa19.55■□□□□ 0.72
USP39-203ENST00000409470 MRPS17Q9Y2R5 130 aaKnown RBP19.55■□□□□ 0.72
USP39-203ENST00000409470 J3KTA2 159 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 NDUFS2O75306 463 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 DNAJB5O75953 348 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 IFNW1P05000 195 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 JUNDP17535 347 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 RYKP34925 604 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 BUD31P41223 144 aaPredicted RBP19.54■□□□□ 0.72
USP39-203ENST00000409470 DEFB134Q4QY38 66 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 NCSTNQ92542 709 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 ZNF607Q96SK3 696 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 PIP5K1AQ99755 562 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 ORAI3Q9BRQ5 295 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 NPLQ9BXD5 320 aaPredicted RBP19.54■□□□□ 0.72
USP39-203ENST00000409470 PILRAQ9UKJ1 303 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 GMPPBQ9Y5P6 360 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 LOC105369274A0A096LPK9 316 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 LOC102723532A0A0G2JNH3 316 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 A0A1W2PS29 197 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 ENO4A6NNW6 628 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 EIF2S1P05198 315 aaKnown RBP19.54■□□□□ 0.72
USP39-203ENST00000409470 NR2F1P10589 423 aa19.54■□□□□ 0.72
USP39-203ENST00000409470 CRHBPP24387 322 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms