RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 TANKQ92844 425 aa13.22□□□□□ -0.29
CHRNA1-204ENST00000409323 KIAA1143Q96AT1 154 aaPredicted RBP13.22□□□□□ -0.29
CHRNA1-204ENST00000409323 CLMPQ9H6B4 373 aa13.22□□□□□ -0.29
CHRNA1-204ENST00000409323 WDR54Q9H977 334 aa13.22□□□□□ -0.29
CHRNA1-204ENST00000409323 SLC35C2Q9NQQ7 365 aa13.22□□□□□ -0.29
CHRNA1-204ENST00000409323 ATP6V1HQ9UI12 483 aa13.22□□□□□ -0.29
CHRNA1-204ENST00000409323 PADI2Q9Y2J8 665 aa13.22□□□□□ -0.29
CHRNA1-204ENST00000409323 C21orf140B9A014 251 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 NME6O75414 186 aaPredicted RBP13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 GPR75O95800 540 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 ABCB1P08183 1280 aaPredicted RBP13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 EIF2S3P41091 472 aaKnown RBP13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 POLR2JP52435 117 aaKnown RBP13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 HSD17B7P56937 341 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 HSPB3Q12988 150 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 KLF10Q13118 480 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 PDE7AQ13946 482 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 VPS26BQ4G0F5 336 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 TIGD2Q4W5G0 525 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 METTL21CQ5VZV1 264 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 ANKRD37Q7Z713 158 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 POU5F2Q8N7G0 328 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 STARD8Q92502 1023 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 BBS4Q96RK4 519 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 ZBTB18Q99592 522 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 DUSP26Q9BV47 211 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 ZIM2Q9NZV7 527 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 NXT1Q9UKK6 140 aaKnown RBP13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 ENTPD4Q9Y227 616 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 RAXQ9Y2V3 346 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 ZNF780BQ9Y6R6 833 aa13.21□□□□□ -0.29
CHRNA1-204ENST00000409323 ACACAQ13085 2346 aa13.21□□□□□ -0.3
CHRNA1-204ENST00000409323 IGKV3D-11A0A0A0MRZ8 115 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 LOC100653049A0A140TA62 436 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 HRKO00198 91 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 NKX2-8O15522 239 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 PDPK1O15530 556 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 OR10H2O60403 315 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 KRT34O76011 436 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 SEC24DO94855 1032 aaPredicted RBP13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 CPMP14384 443 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 CAPN3P20807 821 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 NT5EP21589 574 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 IL10P22301 178 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 S100A3P33764 101 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 GSTM5P46439 218 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 ATP4BP51164 291 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 PGDP52209 483 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 NCBP2P52298 156 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 MRPS35P82673 323 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 SFT2D3Q587I9 215 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 DNAJC14Q6Y2X3 702 aaPredicted RBP13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 R3HCC1LQ7Z5L2 792 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 TREML1Q86YW5 311 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 PARP9Q8IXQ6 854 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 CLEC4FQ8N1N0 589 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 ZNF248Q8NDW4 579 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 SIMC1Q8NDZ2 872 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 OR9A2Q8NGT5 310 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 SUN3Q8TAQ9 357 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 METTL21AQ8WXB1 218 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 KAT2AQ92830 837 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 ERP27Q96DN0 273 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 MAGED4Q96JG8 741 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 ZNF681Q96N22 645 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 GPR87Q9BY21 358 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 GLIPR2Q9H4G4 154 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 KCND3Q9UK17 655 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 MMACHCQ9Y4U1 282 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 HS3ST3B1Q9Y662 390 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 URB1O60287 2271 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 TCRBV16S1A1N1A0A5B0 115 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 CDC14CA4D256 554 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 ERICH4A6NGS2 130 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 CCT8L1PA6NM43 557 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 CCDC22O60826 627 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 CREG1O75629 220 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 CPSF4O95639 269 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 C6orf47O95873 294 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 CT62P0C5K7 136 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 PORP16435 677 aaPredicted RBP13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 TNNI3P19429 210 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 KIR3DL1P43629 444 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 CLNS1AP54105 237 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 WNT3P56703 355 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 OR4D2P58180 307 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 SLC2A7Q6PXP3 512 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 FAM111BQ6SJ93 734 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 UNQ6494/PRO21346Q6UXR6 183 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 PPP1R32Q7Z5V6 425 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 CPSF7Q8N684 471 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 ZNF321PQ8N8H1 164 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 PLPP5Q8NEB5 264 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 SNIP1Q8TAD8 396 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 TESCQ96BS2 214 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 COQ8BQ96D53 544 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 DGAT2Q96PD7 388 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 OR52E6Q96RD3 313 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 PRPF18Q99633 342 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 INPP5KQ9BT40 448 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms