RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 CNOT3O75175 753 aaKnown RBP12.22□□□□□ -0.45
LIMS2-203ENST00000409254 HEXBP07686 556 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 C8orf89P0DMQ9 161 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 CPMP14384 443 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 PORP16435 677 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-203ENST00000409254 S100A3P33764 101 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 DLSTP36957 453 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 STT3AP46977 705 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 ZFP36L2P47974 494 aaKnown RBP12.22□□□□□ -0.45
LIMS2-203ENST00000409254 ALDH9A1P49189 494 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 EMP2P54851 167 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 UFM1P61960 85 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 TXNL4AP83876 142 aaKnown RBP12.22□□□□□ -0.45
LIMS2-203ENST00000409254 GABPB1Q06547 395 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-203ENST00000409254 STX4Q12846 297 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 KLF10Q13118 480 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 SYT16Q17RD7 645 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 FAM174BQ3ZCQ3 159 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 MINDY4Q4G0A6 757 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 VWA2Q5GFL6 755 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 MLIPQ5VWP3 458 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 TMEM64Q6YI46 380 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 MTDHQ86UE4 582 aaKnown RBP12.22□□□□□ -0.45
LIMS2-203ENST00000409254 RAB43Q86YS6 212 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 OR14A16Q8NHC5 309 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 CLHC1Q8NHS4 586 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 CDC26Q8NHZ8 85 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 RP9Q8TA86 221 aaKnown RBP12.22□□□□□ -0.45
LIMS2-203ENST00000409254 ANKRD9Q96BM1 317 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-203ENST00000409254 MOAP1Q96BY2 351 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 SPDL1Q96EA4 605 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 CNRIP1Q96F85 164 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-203ENST00000409254 CCDC115Q96NT0 180 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 DUSP26Q9BV47 211 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 CCDC106Q9BWC9 280 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 GPN2Q9H9Y4 310 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-203ENST00000409254 PPIEQ9UNP9 301 aaKnown RBP12.22□□□□□ -0.45
LIMS2-203ENST00000409254 MAN2B2Q9Y2E5 1009 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 CNTRLQ7Z7A1 2325 aa12.22□□□□□ -0.45
LIMS2-203ENST00000409254 A0A087WV62 115 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 TEX51A0A1B0GUA7 166 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 A0A1W2PP18 115 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 CAPN14A8MX76 684 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 PLOD2O00469 737 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 ALOX12BO75342 701 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 BCAS2O75934 225 aaPredicted RBP12.21□□□□□ -0.45
LIMS2-203ENST00000409254 SOX30O94993 753 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 SNRPB2P08579 225 aaKnown RBP12.21□□□□□ -0.45
LIMS2-203ENST00000409254 ZCCHC18P0CG32 403 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 IL12AP29459 219 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 MNAT1P51948 309 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 STX5Q13190 355 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 KRT72Q14CN4 511 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 NSDHLQ15738 373 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 AGKQ53H12 422 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 SPANXN4Q5MJ08 99 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 C6orf163Q5TEZ5 329 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 LCN10Q6JVE6 187 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 MARCH9Q86YJ5 346 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 FUNDC1Q8IVP5 155 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 DPP10Q8N608 796 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 KRTCAP2Q8N6L1 136 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 TMEM52Q8NDY8 209 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 OR7A2PQ8NGA2 310 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 GOT1L1Q8NHS2 421 aaPredicted RBP12.21□□□□□ -0.45
LIMS2-203ENST00000409254 OR5P2Q8WZ92 322 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 DAZLQ92904 295 aaKnown RBP12.21□□□□□ -0.45
LIMS2-203ENST00000409254 MARK4Q96L34 752 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 TEX37Q96LM6 180 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 PTCHD1Q96NR3 888 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 DGAT2Q96PD7 388 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 BBS4Q96RK4 519 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 YIPF2Q9BWQ6 316 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 TMEM121BQ9BXQ6 578 aaPredicted RBP12.21□□□□□ -0.45
LIMS2-203ENST00000409254 CCDC86Q9H6F5 360 aaKnown RBP12.21□□□□□ -0.45
LIMS2-203ENST00000409254 CCDC167Q9P0B6 97 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 SH3BP4Q9P0V3 963 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 NTMQ9P121 344 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 PTGFRNQ9P2B2 879 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 LEF1Q9UJU2 399 aaPredicted RBP12.21□□□□□ -0.45
LIMS2-203ENST00000409254 PTRH2Q9Y3E5 179 aaKnown RBP12.21□□□□□ -0.45
LIMS2-203ENST00000409254 GMEB1Q9Y692 573 aa12.21□□□□□ -0.45
LIMS2-203ENST00000409254 LOC400499M0QZD8 3231 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 LOC101059948A0A1B0GTJ6 334 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 CCDC154A6NI56 674 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 FAM227AF5H4B4 570 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 AKAP10O43572 662 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 PLOD3O60568 738 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 B4GALT2O60909 372 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 SCN2BO60939 215 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 DNAJB6O75190 326 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 LRATO95237 230 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 UMODP07911 640 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 TRPC1P48995 793 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 XKP51811 444 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 PSPHP78330 225 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 FOXK2Q01167 660 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 MAP4K2Q12851 820 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 CLN3Q13286 438 aa12.2□□□□□ -0.46
LIMS2-203ENST00000409254 MAPKAPK3Q16644 382 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms