RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 COL6A2P12110 1019 aa17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 PRF1P14222 555 aa17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 CNTFP26441 200 aa17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 BUD31P41223 144 aaPredicted RBP17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 PLIN5Q00G26 463 aa17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 ASPHQ12797 758 aa17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 FAM219BQ5XKK7 198 aa17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 CYP20A1Q6UW02 462 aa17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 C9orf40Q8IXQ3 194 aa17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 TMEM151AQ8N4L1 468 aa17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 OR2M7Q8NG81 312 aa17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 OR5L2Q8NGL0 311 aa17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 NTMT1Q9BV86 223 aa17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 LYARQ9NX58 379 aaKnown RBP17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 KLF2Q9Y5W3 355 aaPredicted RBP17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 PPP6CO00743 305 aa17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 ADAM10O14672 748 aa17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 HNRNPRO43390 633 aaKnown RBP17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 GPR75O95800 540 aa17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 AIFM1O95831 613 aa17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 NR2F6P10588 404 aa17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 ALOX15P16050 662 aaPredicted RBP17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 HTR1EP28566 365 aa17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 GCAP28676 217 aa17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 FRG2Q64ET8 278 aa17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 BNC2Q6ZN30 1099 aaPredicted RBP17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 FRG2BQ96QU4 278 aa17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 MRPL57Q9BQC6 102 aaKnown RBP17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 MRPL46Q9H2W6 279 aaKnown RBP17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 TMCO1Q9UM00 188 aa17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 PPT2Q9UMR5 302 aa17.85■□□□□ 0.45
SMARCB1-204ENST00000407422 EXOC1LA0A1B0GW35 172 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 A0A1W2PS29 197 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 PRRG2O14669 202 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 SNRPAP09012 282 aaKnown RBP17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 TSPAN8P19075 237 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 SGO1Q5FBB7 561 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 XKRXQ6PP77 449 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 RTL4Q6ZR62 310 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 NUDT13Q86X67 352 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 ST13P4Q8IZP2 240 aaPredicted RBP17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 C7orf57Q8NEG2 295 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 OR4F6Q8NGB9 312 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 KIF18AQ8NI77 898 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 FBXL20Q96IG2 436 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 SERPINI1Q99574 410 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 CNPPD1Q9BV87 410 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 DEFB127Q9H1M4 99 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 TEX10Q9NXF1 929 aaPredicted RBP17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 HRH3Q9Y5N1 445 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 NINQ8N4C6 2090 aa17.84■□□□□ 0.45
SMARCB1-204ENST00000407422 FAM166BA8MTA8 275 aa17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 PGRMC2O15173 223 aa17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 RPS17P08708 135 aaKnown RBP17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 PTGS2P35354 604 aa17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 CDH13P55290 713 aa17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 PPIAP62937 165 aaKnown RBP17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 HERVK_113P63132 956 aa17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 ERVK-8P63133 956 aa17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 BIKQ13323 160 aa17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 ZNF630Q2M218 657 aaPredicted RBP17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 MPEG1Q2M385 716 aa17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 PIGGQ5H8A4 983 aa17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 TTC19Q6DKK2 380 aaPredicted RBP17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 MILR1Q7Z6M3 343 aa17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 NUBPLQ8TB37 319 aa17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 ERVK-6Q9BXR3 956 aa17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 MRPL1Q9BYD6 325 aaKnown RBP17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 FARSBQ9NSD9 589 aaKnown RBP17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 ERVK-19Q9WJR5 959 aa17.83■□□□□ 0.45
SMARCB1-204ENST00000407422 A8MT66 165 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 KIF2AO00139 706 aaPredicted RBP17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 DYRK3O43781 588 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 OR10H2O60403 315 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 SEMA3DO95025 777 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 CCL3P10147 92 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 SMSP52788 366 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 PLGLB1Q02325 96 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 ZNF267Q14586 743 aaPredicted RBP17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 LETMD1Q6P1Q0 360 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 OPN5Q6U736 354 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 CD163Q86VB7 1156 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 TICAM1Q8IUC6 712 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 LURAP1LQ8IV03 231 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 FAM57AQ8TBR7 257 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 ZNF483Q8TF39 744 aaPredicted RBP17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 RIT1Q92963 219 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 SGCZQ96LD1 299 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 DMRTA2Q96SC8 542 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 TTTY12Q9BZ98 90 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 PLSCR2Q9NRY7 297 aa17.83■□□□□ 0.44
SMARCB1-204ENST00000407422 E9PLN8 166 aa17.82■□□□□ 0.44
SMARCB1-204ENST00000407422 NADKO95544 446 aaPredicted RBP17.82■□□□□ 0.44
SMARCB1-204ENST00000407422 KLK1P06870 262 aa17.82■□□□□ 0.44
SMARCB1-204ENST00000407422 TPOP07202 933 aa17.82■□□□□ 0.44
SMARCB1-204ENST00000407422 ABHD2P08910 425 aa17.82■□□□□ 0.44
SMARCB1-204ENST00000407422 FAM153BP0C7A2 387 aa17.82■□□□□ 0.44
SMARCB1-204ENST00000407422 CNR1P21554 472 aa17.82■□□□□ 0.44
SMARCB1-204ENST00000407422 IFT88Q13099 833 aa17.82■□□□□ 0.44
SMARCB1-204ENST00000407422 FAM153CQ494X1 144 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms