RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 HOXC11O43248 304 aaPredicted RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 LCMT2O60294 686 aaKnown RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 POP7O75817 140 aaKnown RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 SCG5P05408 212 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 RB1P06400 928 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 ADRB3P13945 408 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 HOXB3P14651 431 aaPredicted RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 CHI3L1P36222 383 aaPredicted RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 RPS19P39019 145 aaKnown RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 RECQLP46063 649 aaPredicted RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 KCNJ5P48544 419 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 CLK1P49759 484 aaKnown RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 KHDRBS2Q5VWX1 349 aaKnown RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 PLPP4Q5VZY2 271 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 MORN4Q8NDC4 146 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 PSD4Q8NDX1 1056 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 IL17RDQ8NFM7 739 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 SLC7A13Q8TCU3 470 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 TEFMQ96QE5 360 aaKnown RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 MAPKAP1Q9BPZ7 522 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 ITM2CQ9NQX7 267 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 TMEM39AQ9NV64 488 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 DYRK1BQ9Y463 629 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 CHST2Q9Y4C5 530 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 WWP2O00308 870 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 PRKRAO75569 313 aaKnown RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 TIMP1P01033 207 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 ITGA2P17301 1181 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 ILKQ13418 452 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 KIF18BQ86Y91 864 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 DEPDC4Q8N2C3 294 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 CREB3L4Q8TEY5 395 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 CRELD1Q96HD1 420 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 TRNT1Q96Q11 434 aaKnown RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 RNF208Q9H0X6 261 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 TESQ9UGI8 421 aaKnown RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 DUSP12Q9UNI6 340 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 GPR34Q9UPC5 381 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 PCDHGB6Q9Y5F9 930 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 MYO10Q9HD67 2058 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 A0A0A6YYD5 115 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 TPST2O60704 377 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 OSMP13725 252 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 DGKGP49619 791 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 PRMT2P55345 433 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 REEP5Q00765 189 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 CNTN1Q12860 1018 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 MLF2Q15773 248 aaPredicted RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 SYPL1Q16563 259 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 ATAD3BQ5T9A4 648 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 DEPDC1Q5TB30 811 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 SETD7Q8WTS6 366 aaKnown RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 FOPNLQ96NB1 174 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 OR2A14Q96R47 310 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 IL4I1Q96RQ9 567 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 HOXD1Q9GZZ0 328 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 CXXC1Q9P0U4 656 aaPredicted RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 WDR37Q9Y2I8 494 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 GPC6Q9Y625 555 aaPredicted RBP9.33□□□□□ -0.92
MSH2-202ENST00000406134 LAMA1P25391 3075 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 DOCK8Q8NF50 2099 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 KPNA3O00505 521 aaPredicted RBP9.32□□□□□ -0.92
MSH2-202ENST00000406134 PRKYO43930 277 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 SLITRK5O94991 958 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 MSL3P1P0C860 447 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 CKMT1AP12532 417 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 PTGER1P34995 402 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 SOAT1P35610 550 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 RFX2P48378 723 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 PRIM2P49643 509 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 ZNF45Q02386 682 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 CARTPTQ16568 116 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 TMEM52BQ4KMG9 183 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 RNLSQ5VYX0 342 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 RAET1GQ6H3X3 334 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 GRASPQ7Z6J2 395 aaPredicted RBP9.32□□□□□ -0.92
MSH2-202ENST00000406134 STX19Q8N4C7 294 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 ST13P5Q8NFI4 369 aaPredicted RBP9.32□□□□□ -0.92
MSH2-202ENST00000406134 OR5D16Q8NGK9 328 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 VANGL1Q8TAA9 524 aaPredicted RBP9.32□□□□□ -0.92
MSH2-202ENST00000406134 ACAT2Q9BWD1 397 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 ZDHHC4Q9NPG8 344 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 DNAJC27Q9NZQ0 273 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 TBC1D14Q9P2M4 693 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 ANGPT4Q9Y264 503 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 NUMA1Q14980 2115 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 PRR19A6NJB7 356 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 ANHXE9PGG2 379 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 PTTG1O95997 202 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 ADAP00813 363 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 IFNW1P05000 195 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 ADH5P11766 374 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 MAGP20916 626 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 CASP3P42574 277 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 TAS2R38P59533 333 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 RHAGQ02094 409 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 FOXD4Q12950 439 aaPredicted RBP9.32□□□□□ -0.92
MSH2-202ENST00000406134 TRMT11Q7Z4G4 463 aaKnown RBP9.32□□□□□ -0.92
MSH2-202ENST00000406134 IQCF1Q8N6M8 205 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 FAM46DQ8NEK8 389 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms