RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 GPC1P35052 558 aa27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 FNTBP49356 437 aa27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 BLKP51451 505 aa27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 TGM3Q08188 693 aa27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 ELOAQ14241 798 aaKnown RBP27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 IFI44LQ53G44 452 aa27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 SLC48A1Q6P1K1 146 aa27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 FAM46DQ8NEK8 389 aa27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 REEP1Q9H902 201 aa27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 PDP1Q9P0J1 537 aaPredicted RBP27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 OR5K4A6NMS3 321 aa27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 C2orf74A8MZ97 194 aa27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 BCHEP06276 602 aa27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 TFPTP0C1Z6 253 aa27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 REEP3Q6NUK4 255 aa27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 GALNT5Q7Z7M9 940 aa27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 SLC44A2Q8IWA5 706 aaPredicted RBP27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 CCDC116Q8IYX3 515 aa27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 THUMPD1Q9NXG2 353 aaKnown RBP27.37■■□□□ 1.97
CSNK1E-205ENST00000405675 CACNA1IQ9P0X4 2223 aa27.36■■□□□ 1.97
CSNK1E-205ENST00000405675 TRIM64A6NGJ6 449 aa27.36■■□□□ 1.97
CSNK1E-205ENST00000405675 SLC35G6P0C7Q6 338 aa27.36■■□□□ 1.97
CSNK1E-205ENST00000405675 FEN1P39748 380 aaKnown RBP27.36■■□□□ 1.97
CSNK1E-205ENST00000405675 SZRD1Q7Z422 152 aa27.36■■□□□ 1.97
CSNK1E-205ENST00000405675 ZNF438Q7Z4V0 828 aa27.36■■□□□ 1.97
CSNK1E-205ENST00000405675 IQCHQ86VS3 1027 aa27.36■■□□□ 1.97
CSNK1E-205ENST00000405675 ZDHHC1Q8WTX9 485 aa27.36■■□□□ 1.97
CSNK1E-205ENST00000405675 TMEM19Q96HH6 336 aa27.36■■□□□ 1.97
CSNK1E-205ENST00000405675 MAGED4Q96JG8 741 aa27.36■■□□□ 1.97
CSNK1E-205ENST00000405675 LYARQ9NX58 379 aaKnown RBP27.36■■□□□ 1.97
CSNK1E-205ENST00000405675 DNAJB6O75190 326 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 SMIM10L1P0DMW3 83 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 PAX7P23759 505 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 EPS8Q12929 822 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 GPR19Q15760 415 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 TTC23Q5W5X9 447 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 KLHL6Q8WZ60 621 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 SMIM10Q96HG1 83 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 RSPO3Q9BXY4 272 aaPredicted RBP27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 C3orf18Q9UK00 162 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 ENTPD2Q9Y5L3 495 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 KNL1Q8NG31 2342 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 TDRD6O60522 2096 aaKnown RBP27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 PRAMEF27A3QJZ7 478 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 B4DGG1 531 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 DPM1O60762 260 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 IGFBP5P24593 272 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 ELK4P28324 431 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 RRM2P31350 389 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 NR1H2P55055 460 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 SLC30A8Q8IWU4 369 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 ZNF555Q8NEP9 628 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 LZICQ8WZA0 190 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 DUSP15Q9H1R2 295 aaPredicted RBP27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 RUBCNLQ9H714 662 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 ZCCHC3Q9NUD5 404 aaKnown RBP27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 CEP192Q8TEP8 1941 aa27.35■■□□□ 1.97
CSNK1E-205ENST00000405675 FAM221BA6H8Z2 402 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 CSF2P04141 144 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 YAP1P46937 504 aaKnown RBP27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 ARHGDIAP52565 204 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 KDM4DQ6B0I6 523 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 OR5D16Q8NGK9 328 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 ZFP28Q8NHY6 868 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 BAHD1Q8TBE0 780 aaPredicted RBP27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 DNASE2BQ8WZ79 361 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 NRBF2Q96F24 287 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 SLC35G5Q96KT7 338 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 OR51I1Q9H343 314 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 TMEM74BQ9NUR3 256 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 ANKMY1Q9P2S6 941 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 MRPS2Q9Y399 296 aaKnown RBP27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 TESMINQ9Y4I5 508 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 KLK4Q9Y5K2 254 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 SCN3AQ9NY46 2000 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 C5orf58C9J3I9 102 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 RECKO95980 971 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 OR12D1P0DN82 309 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 HOXA6P31267 233 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 CSNK1EP49674 416 aaKnown RBP27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 HHEXQ03014 270 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 DEFB134Q4QY38 66 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 ZFYVE21Q9BQ24 234 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 EPB41L1Q9H4G0 881 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 ENTPD4Q9Y227 616 aa27.34■■□□□ 1.97
CSNK1E-205ENST00000405675 SMIM31A0A1B0GVY4 71 aa27.33■■□□□ 1.97
CSNK1E-205ENST00000405675 H0YGG7 62 aa27.33■■□□□ 1.97
CSNK1E-205ENST00000405675 IFNA14P01570 189 aa27.33■■□□□ 1.97
CSNK1E-205ENST00000405675 C9P02748 559 aa27.33■■□□□ 1.97
CSNK1E-205ENST00000405675 ARF3P61204 181 aaPredicted RBP27.33■■□□□ 1.97
CSNK1E-205ENST00000405675 RSC1A1Q92681 617 aa27.33■■□□□ 1.97
CSNK1E-205ENST00000405675 ZNF681Q96N22 645 aa27.33■■□□□ 1.97
CSNK1E-205ENST00000405675 EPYCQ99645 322 aa27.33■■□□□ 1.97
CSNK1E-205ENST00000405675 PCDHGA8Q9Y5G5 932 aa27.33■■□□□ 1.97
CSNK1E-205ENST00000405675 A0A0J9YY10 115 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 LOC100130705A0A1B0GUX0 176 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 NME1P15531 152 aaKnown RBP27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 TYRP1P17643 537 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 RAD23AP54725 363 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 DUSP7Q16829 419 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms