RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 TROVE2P10155 538 aaKnown RBP eCLIP9.9□□□□□ -0.82
RPAIN-204ENST00000405578 PRPS2P11908 318 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 DRD2P14416 443 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 ACPPP15309 386 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 MMP11P24347 488 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 TPP2P29144 1249 aaPredicted RBP9.9□□□□□ -0.82
RPAIN-204ENST00000405578 ASMTP46597 345 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 RPS18P62269 152 aaKnown RBP9.9□□□□□ -0.82
RPAIN-204ENST00000405578 SNRPNP63162 240 aaKnown RBP9.9□□□□□ -0.82
RPAIN-204ENST00000405578 GUCY1A3Q02108 690 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 EMX2Q04743 252 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 SERTAD2Q14140 314 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 INPP5JQ15735 1006 aaPredicted RBP9.9□□□□□ -0.82
RPAIN-204ENST00000405578 UGT8Q16880 541 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 C6orf136Q5SQH8 315 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 NDUFAF5Q5TEU4 345 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 NXNQ6DKJ4 435 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 OR52E8Q6IFG1 317 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 MRM1Q6IN84 353 aaKnown RBP9.9□□□□□ -0.82
RPAIN-204ENST00000405578 QSOX2Q6ZRP7 698 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 ACAD11Q709F0 780 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 IKBIPQ70UQ0 350 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 SAMD14Q8IZD0 417 aaPredicted RBP9.9□□□□□ -0.82
RPAIN-204ENST00000405578 PLPP5Q8NEB5 264 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 OR2T11Q8NH01 316 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 CDC26Q8NHZ8 85 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 MARVELD3Q96A59 401 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 EBPLQ9BY08 206 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 VN1R1Q9GZP7 353 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 CCDC134Q9H6E4 229 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 SLCO1B3Q9NPD5 702 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 MIEF1Q9NQG6 463 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 LANCL2Q9NS86 450 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 GIMAP4Q9NUV9 329 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 MAPRE3Q9UPY8 281 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 ATG4BQ9Y4P1 393 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 POLR3HQ9Y535 204 aaPredicted RBP9.9□□□□□ -0.82
RPAIN-204ENST00000405578 ASB4Q9Y574 426 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 USH1CQ9Y6N9 552 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 ANKRD12Q6UB98 2062 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 A0A1W2PR48 441 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 FAM227AF5H4B4 570 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 POLR3GO15318 223 aaPredicted RBP9.89□□□□□ -0.83
RPAIN-204ENST00000405578 EDF1O60869 148 aaKnown RBP9.89□□□□□ -0.83
RPAIN-204ENST00000405578 DIAPH2O60879 1101 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 CNOT3O75175 753 aaKnown RBP9.89□□□□□ -0.83
RPAIN-204ENST00000405578 DNAJB6O75190 326 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 JRKO75564 520 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 AIFM1O95831 613 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 UMODP07911 640 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 COX7A2P14406 83 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 LBPP18428 481 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 RPL3P39023 403 aaKnown RBP9.89□□□□□ -0.83
RPAIN-204ENST00000405578 ALDH9A1P49189 494 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 PGDP52209 483 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 RRADP55042 308 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 HNRNPH2P55795 449 aaKnown RBP9.89□□□□□ -0.83
RPAIN-204ENST00000405578 TAS2R50P59544 299 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 AP2B1P63010 937 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 ERVK-8P63133 956 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 ACTN3Q08043 901 aaPredicted RBP9.89□□□□□ -0.83
RPAIN-204ENST00000405578 RFTN2Q52LD8 501 aaPredicted RBP9.89□□□□□ -0.83
RPAIN-204ENST00000405578 LAPTM4BQ86VI4 370 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 C16orf78Q8WTQ4 265 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 TM4SF18Q96CE8 201 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 C11orf24Q96F05 449 aaPredicted RBP9.89□□□□□ -0.83
RPAIN-204ENST00000405578 C3orf30Q96M34 536 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 FER1L6-AS2Q96M78 137 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 C5orf34Q96MH7 638 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 PELOQ9BRX2 385 aaKnown RBP9.89□□□□□ -0.83
RPAIN-204ENST00000405578 AKTIPQ9H8T0 292 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 MYNNQ9NPC7 610 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 NOP53Q9NZM5 478 aaKnown RBP9.89□□□□□ -0.83
RPAIN-204ENST00000405578 SLC5A6Q9Y289 635 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 DLGAP4Q9Y2H0 992 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 ZNF780BQ9Y6R6 833 aa9.89□□□□□ -0.83
RPAIN-204ENST00000405578 NSG1A0A0A6YYJ2 146 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 HNRNPRO43390 633 aaKnown RBP9.88□□□□□ -0.83
RPAIN-204ENST00000405578 OR10H2O60403 315 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 GPR75O95800 540 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 IFNA16P05015 189 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 JUNP05412 331 aaKnown RBP9.88□□□□□ -0.83
RPAIN-204ENST00000405578 IL3P08700 152 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 BCKDHAP12694 445 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 ICAM2P13598 275 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 PIK3R1P27986 724 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 EPHA3P29320 983 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 HPCAL1P37235 193 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 AQP5P55064 265 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 OR4D2P58180 307 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 RAE1P78406 368 aaKnown RBP9.88□□□□□ -0.83
RPAIN-204ENST00000405578 PLIN5Q00G26 463 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 RHAGQ02094 409 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 C2orf80Q0P641 193 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 IL10RAQ13651 578 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 KIAA0040Q15053 153 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 RPS6KA2Q15349 733 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 KRTAP21-3Q3LHN1 58 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 C6orf163Q5TEZ5 329 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 IRAK1BP1Q5VVH5 260 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms