RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 OR5P2Q8WZ92 322 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 KAT2AQ92830 837 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 DPYSL5Q9BPU6 564 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 CPPED1Q9BRF8 314 aaPredicted RBP3.5□□□□□ -1.85
RTN4-208ENST00000404909 LYRM4Q9HD34 91 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 NEUROD4Q9HD90 331 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 TMEM9BQ9NQ34 198 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 DNAAF2Q9NVR5 837 aaKnown RBP3.5□□□□□ -1.85
RTN4-208ENST00000404909 TAS2R7Q9NYW3 318 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 NKX1-2Q9UD57 310 aaPredicted RBP3.5□□□□□ -1.85
RTN4-208ENST00000404909 BCAP29Q9UHQ4 241 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 CES1P1Q9UKY3 287 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 AURKCQ9UQB9 309 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 TMEM184BQ9Y519 407 aaPredicted RBP3.5□□□□□ -1.85
RTN4-208ENST00000404909 SNX13Q9Y5W8 968 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 ELOVL7A1L3X0 281 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 D6RAR5 112 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 CYR61O00622 381 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 HYAL3O43820 417 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 FGF17O60258 216 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 NME6O75414 186 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 JRKO75564 520 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 ZNF883P0CG24 379 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 RNH1P13489 461 aaKnown RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 ETFAP13804 333 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 ATP6V1B2P21281 511 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 AQP1P29972 269 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 XCR1P46094 333 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 CCT3P49368 545 aaKnown RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 PRIM2P49643 509 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 NUBP1P53384 320 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 BNIP2Q12982 314 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 C16orf72Q14CZ0 275 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 LTB4RQ15722 352 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 SNCBQ16143 134 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 MINDY4Q4G0A6 757 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 COX20Q5RI15 118 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 GARNL3Q5VVW2 1013 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 GLYATQ6IB77 296 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 TNFAIP8L2Q6P589 184 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 ARHGAP22Q7Z5H3 698 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 KMT5CQ86Y97 462 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 NAXDQ8IW45 347 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 LRRC25Q8N386 305 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 ARHGEF39Q8N4T4 335 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 PRSS33Q8NF86 280 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 ZFP28Q8NHY6 868 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 FBXO30Q8TB52 745 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 ZFP90Q8TF47 636 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 JADE3Q92613 823 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 PPWD1Q96BP3 646 aaKnown RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 OTUB1Q96FW1 271 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 ZNF285Q96NJ3 590 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 CTRCQ99895 268 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 YIPF4Q9BSR8 244 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 CHRNA10Q9GZZ6 450 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 EQTNQ9NQ60 294 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 ACSS1Q9NUB1 689 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 ZCCHC3Q9NUD5 404 aaKnown RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 TRPC4Q9UBN4 977 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 FAF1Q9UNN5 650 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 ASPMQ8IZT6 3477 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 KIF26BQ2KJY2 2108 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 TOX3O15405 576 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 NSA2O95478 260 aaKnown RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 ZCCHC18P0CG32 403 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 CD59P13987 128 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 HOXB9P17482 250 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 UQCRC2P22695 453 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 MC3RP41968 323 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 CLDN6P56747 220 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 RAB38P57729 211 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 AP2B1P63010 937 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 ACY1Q03154 408 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 ABHD18Q0P651 414 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 STX4Q12846 297 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 TRAP1Q12931 704 aaKnown RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 RIPK1Q13546 671 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 RGNQ15493 299 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 TLDC1Q6P9B6 456 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 C6orf120Q7Z4R8 191 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 GALNT10Q86SR1 603 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 TMEM126BQ8IUX1 230 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 NATD1Q8N6N6 113 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 OR10Q1Q8NGQ4 319 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 OR51Q1Q8NH59 317 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 GOT1L1Q8NHS2 421 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 SUN3Q8TAQ9 357 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 FAM162AQ96A26 154 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 ZNF501Q96CX3 271 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 NSMCE2Q96MF7 247 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 PHF12Q96QT6 1004 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 SEPHS2Q99611 448 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 TRIM15Q9C019 465 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 DCLRE1BQ9H816 532 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 RNPEPL1Q9HAU8 725 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 APMAPQ9HDC9 416 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 OCIAD1Q9NX40 245 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 ACTR3BQ9P1U1 418 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 RARRES3Q9UL19 164 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms