RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 C10orf62Q5T681 223 aaPredicted RBP12.34□□□□□ -0.43
SDF4-203ENST00000403997 OPN5Q6U736 354 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 Q6ZPB1 254 aaPredicted RBP12.34□□□□□ -0.43
SDF4-203ENST00000403997 DGAT2L6Q6ZPD8 337 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 NUDT13Q86X67 352 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 PSD4Q8NDX1 1056 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 C16orf52Q8NHV5 167 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 TRPC4APQ8TEL6 797 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 ZNF483Q8TF39 744 aaPredicted RBP12.34□□□□□ -0.43
SDF4-203ENST00000403997 UCN3Q969E3 161 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 CCDC120Q96HB5 630 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 PELOQ9BRX2 385 aaKnown RBP12.34□□□□□ -0.43
SDF4-203ENST00000403997 CNPPD1Q9BV87 410 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 TMEM216Q9P0N5 145 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 PCNX1Q96RV3 2341 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 A0A1B0GTL3 188 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 GOLGA8RI6L899 631 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 HRKO00198 91 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 PGRMC2O15173 223 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 HS6ST1O60243 411 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 CDC40O60508 579 aaKnown RBP eCLIP12.33□□□□□ -0.44
SDF4-203ENST00000403997 SUPT7LO94864 414 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 AIFM1O95831 613 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 PTGER1P34995 402 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 HSD17B3P37058 310 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 HERVK_113P63132 956 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 ERVK-8P63133 956 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 PLGLB1Q02325 96 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 CLCQ05315 142 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 ASPHQ12797 758 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 GGTA1PQ4G0N0 100 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 PIGGQ5H8A4 983 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 CCNYL2Q5T2Q4 361 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 LETMD1Q6P1Q0 360 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 RTL4Q6ZR62 310 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 PAGE2Q7Z2X7 111 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 MRGPRGQ86SM5 289 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 ST13P4Q8IZP2 240 aaPredicted RBP12.33□□□□□ -0.44
SDF4-203ENST00000403997 ZFP62Q8NB50 900 aaPredicted RBP12.33□□□□□ -0.44
SDF4-203ENST00000403997 LRRN4CLQ8ND94 238 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 MYRIPQ8NFW9 859 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 ITLN2Q8WWU7 325 aaPredicted RBP12.33□□□□□ -0.44
SDF4-203ENST00000403997 SELENOMQ8WWX9 145 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 RIT1Q92963 219 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 ERVK-6Q9BXR3 956 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 MRPL1Q9BYD6 325 aaKnown RBP12.33□□□□□ -0.44
SDF4-203ENST00000403997 TXLNGYQ9BZA5 131 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 FARSBQ9NSD9 589 aaKnown RBP12.33□□□□□ -0.44
SDF4-203ENST00000403997 DEPPQ9NTK1 212 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.33□□□□□ -0.448e-6■□□□□ 9.8
SDF4-203ENST00000403997 TBK1Q9UHD2 729 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 SNX6Q9UNH7 406 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 SLC12A4Q9UP95 1085 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 ERVK-19Q9WJR5 959 aa12.33□□□□□ -0.44
SDF4-203ENST00000403997 ANKRD17O75179 2603 aaKnown RBP12.33□□□□□ -0.44
SDF4-203ENST00000403997 A0A1B0GTH9 108 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 PRSS44E7EML9 344 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 G3V3Y1 287 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 PRRG2O14669 202 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 ZNF354AO60765 605 aaPredicted RBP12.32□□□□□ -0.44
SDF4-203ENST00000403997 PDE9AO76083 593 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 OR4F21O95013 312 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 PDYNP01213 254 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 IGKV3-11P04433 115 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 PYGBP11216 843 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 CNR1P21554 472 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 PIK3R1P27986 724 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 PPIAP62937 165 aaKnown RBP12.32□□□□□ -0.44
SDF4-203ENST00000403997 MPEG1Q2M385 716 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 UNC50Q53HI1 259 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 ZNF678Q5SXM1 525 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 SP5Q6BEB4 398 aaPredicted RBP12.32□□□□□ -0.44
SDF4-203ENST00000403997 OR52E8Q6IFG1 317 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 RPTNQ6XPR3 784 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 BNC2Q6ZN30 1099 aaPredicted RBP12.32□□□□□ -0.44
SDF4-203ENST00000403997 SLC29A4Q7RTT9 530 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 LCA5Q86VQ0 697 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 C9orf40Q8IXQ3 194 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 GSPT2Q8IYD1 628 aaKnown RBP12.32□□□□□ -0.44
SDF4-203ENST00000403997 METTL4Q8N3J2 472 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 ZNF808Q8N4W9 903 aaPredicted RBP12.32□□□□□ -0.44
SDF4-203ENST00000403997 OR2M7Q8NG81 312 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 OR52N2Q8NGI0 321 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 NUBPLQ8TB37 319 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 FBXL20Q96IG2 436 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 SGCZQ96LD1 299 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 C1QTNF3Q9BXJ4 246 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 DEFB127Q9H1M4 99 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 TEX10Q9NXF1 929 aaPredicted RBP12.32□□□□□ -0.44
SDF4-203ENST00000403997 PSMC3IPQ9P2W1 217 aaPredicted RBP12.32□□□□□ -0.44
SDF4-203ENST00000403997 ADAM29Q9UKF5 820 aa12.32□□□□□ -0.44
SDF4-203ENST00000403997 PINLYPA6NC86 204 aa12.31□□□□□ -0.44
SDF4-203ENST00000403997 DLX3O60479 287 aa12.31□□□□□ -0.44
SDF4-203ENST00000403997 GUCY1B2O75343 617 aa12.31□□□□□ -0.44
SDF4-203ENST00000403997 P04436 131 aa12.31□□□□□ -0.44
SDF4-203ENST00000403997 SLC35E2P0CK97 266 aa12.31□□□□□ -0.44
SDF4-203ENST00000403997 IMPDH1P20839 514 aa12.31□□□□□ -0.44
SDF4-203ENST00000403997 ATP5F1P24539 256 aaPredicted RBP12.31□□□□□ -0.44
SDF4-203ENST00000403997 PTGS2P35354 604 aa12.31□□□□□ -0.44
SDF4-203ENST00000403997 SMSP52788 366 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms