RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 MOGSQ13724 837 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 UBAP2LQ14157 1087 aaKnown RBP10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 MTX3Q5HYI7 312 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 GRHL2Q6ISB3 625 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 BMP8AQ7Z5Y6 402 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 FER1L6-AS2Q96M78 137 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 PITX2Q99697 317 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 TMEM185BQ9H7F4 350 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 HHATLQ9HCP6 504 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 KCNN3Q9UGI6 736 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 ELOVL7A1L3X0 281 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 A8MV72 311 aaPredicted RBP10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 EFCAB9A8MZ26 197 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 ONECUT3O60422 494 aaPredicted RBP10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 DDCP20711 480 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 IGFBP5P24593 272 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 GPR33Q49SQ1 333 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 CCDC58Q4VC31 144 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 RBM48Q5RL73 367 aaKnown RBP10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 FAM122CQ6P4D5 195 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 CPSF7Q8N684 471 aaKnown RBP10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 HSPBAP1Q96EW2 488 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 FKRPQ9H9S5 495 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 CLK4Q9HAZ1 481 aaKnown RBP10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 IGSF9Q9P2J2 1179 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 WIF1Q9Y5W5 379 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 BCL9LQ86UU0 1499 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 LILRB5O75023 590 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 STK17BO94768 372 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 CLEC3BP05452 202 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 PABPC4LP0CB38 370 aaKnown RBP10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 SLC15A1P46059 708 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 HERC3Q15034 1050 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 IFI44LQ53G44 452 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 NEDD4LQ96PU5 975 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 GPATCH2Q9NW75 528 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 SCML2Q9UQR0 700 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 PRELID1Q9Y255 219 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 TMED5Q9Y3A6 229 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 A0A1W2PPM1 405 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 GXYLT2A0PJZ3 443 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 K7EPI3 171 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 NADKO95544 446 aaPredicted RBP10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 TGM6O95932 706 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 CD1BP29016 333 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 POU3F4P49335 361 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 STK19P49842 368 aaPredicted RBP10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 TAS2R39P59534 338 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 SIRPAP78324 504 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 MZT1Q08AG7 82 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 SLC30A8Q8IWU4 369 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 ITPKCQ96DU7 683 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 CDK15Q96Q40 435 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 SAV1Q9H4B6 383 aaPredicted RBP10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 LRFN1Q9P244 771 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 ANKMY1Q9P2S6 941 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 COMMD3Q9UBI1 195 aa10.53□□□□□ -0.72
CACNA1C-216ENST00000399638 ZNF705GA8MUZ8 300 aaPredicted RBP10.52□□□□□ -0.72
CACNA1C-216ENST00000399638 OAS1P00973 400 aaKnown RBP10.52□□□□□ -0.72
CACNA1C-216ENST00000399638 ARAFP10398 606 aa10.52□□□□□ -0.72
CACNA1C-216ENST00000399638 HES1Q14469 280 aa10.52□□□□□ -0.72
CACNA1C-216ENST00000399638 ZNF460Q14592 562 aa10.52□□□□□ -0.72
CACNA1C-216ENST00000399638 ZNF701Q9NV72 531 aaPredicted RBP10.52□□□□□ -0.72
CACNA1C-216ENST00000399638 PDE10AQ9Y233 779 aa10.52□□□□□ -0.72
CACNA1C-216ENST00000399638 B3GALT1Q9Y5Z6 326 aa10.52□□□□□ -0.72
CACNA1C-216ENST00000399638 PRAMEF26H0Y7S4 382 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 MEF2AQ02078 507 aaPredicted RBP10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 DPY19L3Q6ZPD9 716 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 SLC26A9Q7LBE3 791 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 NRROSQ86YC3 692 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 ZNF454Q8N9F8 522 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 H1FXQ92522 213 aaKnown RBP10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 SLC17A9Q9BYT1 436 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 TXLNGYQ9BZA5 131 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 GOLGA4Q13439 2230 aaKnown RBP10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 H7BY64 318 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 AP2A1O95782 977 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 ETV3P41162 512 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 NOMO1Q15155 1222 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 UGT8Q16880 541 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 ZNF773Q6PK81 442 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 GTF2H4Q92759 462 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 NAT6Q93015 286 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 PRAP1Q96NZ9 151 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 SCGB3A2Q96PL1 93 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 OR5B2Q96R09 309 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 EFCAB11Q9BUY7 163 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 HERC2P3Q9BVR0 1158 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 ZNF395Q9H8N7 513 aaPredicted RBP10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 BOLA2-SMG1P6H3BVE0 249 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 TOR1BO14657 336 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 COCHO43405 550 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 RNH1P13489 461 aaKnown RBP10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 ARSAP15289 507 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 ETV5P41161 510 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 TPTEP56180 551 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 VMACQ2NL98 169 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 MS4A13Q5J8X5 152 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 FBXL22Q6P050 247 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 OR6N2Q8NGY6 317 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms