RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 KLF16Q9BXK1 252 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC13-202ENST00000399438 PRRG3Q9BZD7 231 aa5.91□□□□□ -1.46
TRAPPC13-202ENST00000399438 CTDSP1Q9GZU7 261 aa5.91□□□□□ -1.46
TRAPPC13-202ENST00000399438 RIMS4Q9H426 269 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC13-202ENST00000399438 NMRAL1Q9HBL8 299 aa5.91□□□□□ -1.46
TRAPPC13-202ENST00000399438 MAN2C1Q9NTJ4 1040 aa5.91□□□□□ -1.46
TRAPPC13-202ENST00000399438 UBQLN2Q9UHD9 624 aa5.91□□□□□ -1.46
TRAPPC13-202ENST00000399438 WASF3Q9UPY6 502 aa5.91□□□□□ -1.46
TRAPPC13-202ENST00000399438 CACNG2Q9Y698 323 aa5.91□□□□□ -1.46
TRAPPC13-202ENST00000399438 TRIOO75962 3097 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 A0A1B0GTW7 788 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 HHLA1C9JL84 531 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 SERPINI2O75830 405 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 AP2A1O95782 977 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 BCL10O95999 233 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 GHRHP01286 108 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 SERPINE1P05121 402 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 BMP2P12643 396 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 KCNE1P15382 129 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 GLDCP23378 1020 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 WARSP23381 471 aaKnown RBP5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 RPL10P27635 214 aaKnown RBP5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 BCAP31P51572 246 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 ITGA1P56199 1179 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 PLOD1Q02809 727 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 TRIP10Q15642 601 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 FAM171BQ6P995 826 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 CYP2R1Q6VVX0 501 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 TMEM173Q86WV6 379 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 Q8NA96 180 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 OR6K2Q8NGY2 324 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 SNX33Q8WV41 574 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 PSMG2Q969U7 264 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 RBBP8Q99708 897 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 SLC29A1Q99808 456 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 SCNM1Q9BWG6 230 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 ANKRD60Q9BZ19 345 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 SLC25A32Q9H2D1 315 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 SEMA6AQ9H2E6 1030 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 EBF3Q9H4W6 596 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 FAM96AQ9H5X1 160 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 SRD5A3Q9H8P0 318 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 TLR9Q9NR96 1032 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 SMPD4Q9NXE4 827 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 CLEC5AQ9NY25 188 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 IFT52Q9Y366 437 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 SIP14410 1827 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 GON4LQ3T8J9 2241 aa5.9□□□□□ -1.46
TRAPPC13-202ENST00000399438 G3V2L1 256 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 GLRA3O75311 464 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 CCNB2O95067 398 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 SBK3P0C264 359 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 MMP9P14780 707 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 PDHA2P29803 388 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 FDFT1P37268 417 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 ECT2LQ008S8 904 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 CD69Q07108 199 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 SPEM2Q0P670 501 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 UPP1Q16831 310 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 DNAL1Q4LDG9 190 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 GDF7Q7Z4P5 450 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 SCD5Q86SK9 330 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 GHDCQ8N2G8 530 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 RAET1EQ8TD07 263 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 CAPSLQ8WWF8 208 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 SMARCD1Q96GM5 515 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 OLFM1Q99784 485 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 EGFL8Q99944 293 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 PELOQ9BRX2 385 aaKnown RBP5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 ASPNQ9BXN1 380 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 TRIM4Q9C037 500 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 SLAMF7Q9NQ25 335 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 ZDHHC8Q9ULC8 765 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 Q9Y3F1 56 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 INSL6Q9Y581 213 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 STON1Q9Y6Q2 735 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 COL1A2P08123 1366 aa5.9□□□□□ -1.47
TRAPPC13-202ENST00000399438 FAM95CA0A1B0GW59 222 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 TPST1O60507 370 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 CABYRO75952 493 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 MT-ND1P03886 318 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 IL6P05231 212 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ITGAXP20702 1163 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ZNF10P21506 573 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 CSF2RBP32927 897 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 KCNQ1P51787 676 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 AQP4P55087 323 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 HNRNPKP61978 463 aaKnown RBP eCLIP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 RBPJQ06330 500 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SLC34A1Q06495 639 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 ALKBH6Q3KRA9 238 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 LSM12Q3MHD2 195 aaKnown RBP5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 MGAT5BQ3V5L5 792 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SFT2D3Q587I9 215 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 TMIGD1Q6UXZ0 262 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 LINGO4Q6UY18 593 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SLC46A3Q7Z3Q1 461 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SLC51BQ86UW2 128 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 TMPRSS6Q8IU80 811 aa5.89□□□□□ -1.47
TRAPPC13-202ENST00000399438 SP7Q8TDD2 431 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms