RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 CDH13P55290 713 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 MPEG1Q2M385 716 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 RNFT1Q5M7Z0 435 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 ZNF678Q5SXM1 525 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 TEX35Q5T0J7 233 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 OR52E8Q6IFG1 317 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 C16orf47Q6ZP98 133 aaPredicted RBP13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 MDGA2Q7Z553 956 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 SLC22A9Q8IVM8 553 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 SULF2Q8IWU5 870 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 GSPT2Q8IYD1 628 aaKnown RBP13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 GHDCQ8N2G8 530 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 PSD4Q8NDX1 1056 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 C16orf52Q8NHV5 167 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 MAGED4Q96JG8 741 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 TMEM237Q96Q45 408 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 ZNF382Q96SR6 550 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 MRPL1Q9BYD6 325 aaKnown RBP13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 TSPAN10Q9H1Z9 355 aaPredicted RBP13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 LIN28AQ9H9Z2 209 aaKnown RBP13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 PPCSQ9HAB8 311 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 SUCOQ9UBS9 1254 aaKnown RBP13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 ZNF225Q9UK10 706 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 NPIPA1Q9UND3 350 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 STK38LQ9Y2H1 464 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 PPP6CO00743 305 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 SUPT7LO94864 414 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 OR6B1O95007 311 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 PDYNP01213 254 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 SLC35E2P0CK97 266 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 HSD3B1P14060 373 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 IMPDH1P20839 514 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 HSD3B2P26439 372 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 CASP6P55212 293 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 RASA2Q15283 850 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 UNC50Q53HI1 259 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 HIST2H2BCQ6DN03 193 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 OPN5Q6U736 354 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 DGAT2L6Q6ZPD8 337 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 TDRPQ86YL5 185 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 SPPL2CQ8IUH8 684 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 GOLM1Q8NBJ4 401 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 TRPC4APQ8TEL6 797 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 SELENOMQ8WWX9 145 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 PPWD1Q96BP3 646 aaKnown RBP13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 L3HYPDHQ96EM0 354 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 SGCZQ96LD1 299 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 NMRK1Q9NWW6 199 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 TEX10Q9NXF1 929 aaPredicted RBP13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 DCDC2Q9UHG0 476 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 SLC12A4Q9UP95 1085 aa13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 NCOA6Q14686 2063 aaPredicted RBP13.78□□□□□ -0.2
SMIM11A-203ENST00000399299 ARHGAP10A1A4S6 786 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 GLOD5A6NK44 160 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 OR6C76A6NM76 312 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 WASHC1A8K0Z3 465 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 GOLGA8RI6L899 631 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 CCL21O00585 134 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 TFECO14948 347 aaPredicted RBP13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 OR10H2O60403 315 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 GUCY1B2O75343 617 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 OR4F21O95013 312 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 KRT6AP02538 564 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 GBAP04062 536 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 KRT6BP04259 564 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 KLK1P06870 262 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 PYGBP11216 843 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 TSPAN8P19075 237 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 KRT6CP48668 564 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 PRKAA2P54646 552 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 GALNT1Q10472 559 aaPredicted RBP13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 PIGGQ5H8A4 983 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 IL20RBQ6UXL0 311 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 RTL4Q6ZR62 310 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 COMMD6Q7Z4G1 85 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 CHERPQ8IWX8 916 aaKnown RBP13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 C9orf40Q8IXQ3 194 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 RIT1Q92963 219 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 CCDC126Q96EE4 140 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 CCDC120Q96HB5 630 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 PCNX1Q96RV3 2341 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 FARSBQ9NSD9 589 aaKnown RBP13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 TBK1Q9UHD2 729 aa13.77□□□□□ -0.21
SMIM11A-203ENST00000399299 EML6Q6ZMW3 1958 aa13.76□□□□□ -0.21
SMIM11A-203ENST00000399299 HRKO00198 91 aa13.76□□□□□ -0.21
SMIM11A-203ENST00000399299 PGRMC2O15173 223 aa13.76□□□□□ -0.21
SMIM11A-203ENST00000399299 ZNF354AO60765 605 aaPredicted RBP13.76□□□□□ -0.21
SMIM11A-203ENST00000399299 GLRA3O75311 464 aa13.76□□□□□ -0.21
SMIM11A-203ENST00000399299 PIK3R1P27986 724 aa13.76□□□□□ -0.21
SMIM11A-203ENST00000399299 MAPK12P53778 367 aa13.76□□□□□ -0.21
SMIM11A-203ENST00000399299 PKNOX1P55347 436 aa13.76□□□□□ -0.21
SMIM11A-203ENST00000399299 SLC37A1P57057 533 aa13.76□□□□□ -0.21
SMIM11A-203ENST00000399299 GPR85P60893 370 aa13.76□□□□□ -0.21
SMIM11A-203ENST00000399299 NAA20P61599 178 aa13.76□□□□□ -0.21
SMIM11A-203ENST00000399299 ERVK-8P63133 956 aa13.76□□□□□ -0.21
SMIM11A-203ENST00000399299 TBL3Q12788 808 aaKnown RBP13.76□□□□□ -0.21
SMIM11A-203ENST00000399299 CSTF3Q12996 717 aaKnown RBP13.76□□□□□ -0.21
SMIM11A-203ENST00000399299 LCP2Q13094 533 aa13.76□□□□□ -0.21
SMIM11A-203ENST00000399299 ZNF267Q14586 743 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms