RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 GNLYP22749 145 aa23.81■■□□□ 1.4
U2AF1-203ENST00000398137 HSD17B7P56937 341 aa23.81■■□□□ 1.4
U2AF1-203ENST00000398137 TAS2R50P59544 299 aa23.81■■□□□ 1.4
U2AF1-203ENST00000398137 TRA2BP62995 288 aaKnown RBP23.81■■□□□ 1.4
U2AF1-203ENST00000398137 ID2Q02363 134 aa23.81■■□□□ 1.4
U2AF1-203ENST00000398137 ZNF763Q0D2J5 394 aa23.81■■□□□ 1.4
U2AF1-203ENST00000398137 INPP5JQ15735 1006 aaPredicted RBP23.81■■□□□ 1.4
U2AF1-203ENST00000398137 NSDHLQ15738 373 aa23.81■■□□□ 1.4
U2AF1-203ENST00000398137 PLEKHN1Q494U1 663 aaPredicted RBP23.81■■□□□ 1.4
U2AF1-203ENST00000398137 C6orf136Q5SQH8 315 aa23.81■■□□□ 1.4
U2AF1-203ENST00000398137 IGFL3Q6UXB1 125 aa23.81■■□□□ 1.4
U2AF1-203ENST00000398137 MAVSQ7Z434 540 aa23.81■■□□□ 1.4
U2AF1-203ENST00000398137 PLPP5Q8NEB5 264 aa23.81■■□□□ 1.4
U2AF1-203ENST00000398137 UCN3Q969E3 161 aa23.81■■□□□ 1.4
U2AF1-203ENST00000398137 FCRL1Q96LA6 429 aa23.81■■□□□ 1.4
U2AF1-203ENST00000398137 C1orf50Q9BV19 199 aa23.81■■□□□ 1.4
U2AF1-203ENST00000398137 WDR41Q9HAD4 459 aa23.81■■□□□ 1.4
U2AF1-203ENST00000398137 USP9XQ93008 2570 aaPredicted RBP23.81■■□□□ 1.4
U2AF1-203ENST00000398137 IGKV3D-11A0A0A0MRZ8 115 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 MYOCOSA0A1B0GUC4 107 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 BLACEA4D250 179 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 TRPC5OSA6NMA1 111 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 SDHDO14521 159 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 LDB3O75112 727 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 TMEM205Q6UW68 189 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 ANKRD37Q7Z713 158 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 ATCAYQ86WG3 371 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 FNDC5Q8NAU1 212 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 GALNT11Q8NCW6 608 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 AKTIPQ9H8T0 292 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 ATP13A2Q9NQ11 1180 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 G3BP2Q9UN86 482 aaKnown RBP23.8■■□□□ 1.4
U2AF1-203ENST00000398137 TMED5Q9Y3A6 229 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 USH1CQ9Y6N9 552 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 LRRK2Q5S007 2527 aa23.8■■□□□ 1.4
U2AF1-203ENST00000398137 WASHC1A8K0Z3 465 aa23.79■■□□□ 1.4
U2AF1-203ENST00000398137 FGF17O60258 216 aa23.79■■□□□ 1.4
U2AF1-203ENST00000398137 CTNSO60931 367 aa23.79■■□□□ 1.4
U2AF1-203ENST00000398137 MDH1P40925 334 aaKnown RBP23.79■■□□□ 1.4
U2AF1-203ENST00000398137 Q0VFX4 171 aa23.79■■□□□ 1.4
U2AF1-203ENST00000398137 OR52E8Q6IFG1 317 aa23.79■■□□□ 1.4
U2AF1-203ENST00000398137 OR4N5Q8IXE1 308 aa23.79■■□□□ 1.4
U2AF1-203ENST00000398137 FAM26EQ8N5C1 309 aa23.79■■□□□ 1.4
U2AF1-203ENST00000398137 OR11G2Q8NGC1 345 aa23.79■■□□□ 1.4
U2AF1-203ENST00000398137 FAIM2Q9BWQ8 316 aa23.79■■□□□ 1.4
U2AF1-203ENST00000398137 WDR55Q9H6Y2 383 aaPredicted RBP23.79■■□□□ 1.4
U2AF1-203ENST00000398137 MYNNQ9NPC7 610 aa23.79■■□□□ 1.4
U2AF1-203ENST00000398137 C19orf25Q9UFG5 118 aaPredicted RBP23.79■■□□□ 1.4
U2AF1-203ENST00000398137 PCDHA9Q9Y5H5 950 aa23.79■■□□□ 1.4
U2AF1-203ENST00000398137 CLDN16Q9Y5I7 305 aa23.79■■□□□ 1.4
U2AF1-203ENST00000398137 CSAG2Q9Y5P2 127 aa23.79■■□□□ 1.4
U2AF1-203ENST00000398137 IGHV3-20A0A0C4DH32 117 aa23.78■■□□□ 1.4
U2AF1-203ENST00000398137 GOLGA8QA0A0J9YX86 632 aa23.78■■□□□ 1.4
U2AF1-203ENST00000398137 GOLGA8OA6NCC3 632 aa23.78■■□□□ 1.4
U2AF1-203ENST00000398137 GOLGA8NF8WBI6 632 aa23.78■■□□□ 1.4
U2AF1-203ENST00000398137 PGRMC2O15173 223 aa23.78■■□□□ 1.4
U2AF1-203ENST00000398137 EDF1O60869 148 aaKnown RBP23.78■■□□□ 1.4
U2AF1-203ENST00000398137 SDC1P18827 310 aa23.78■■□□□ 1.4
U2AF1-203ENST00000398137 TACR1P25103 407 aa23.78■■□□□ 1.4
U2AF1-203ENST00000398137 ALDH9A1P49189 494 aa23.78■■□□□ 1.4
U2AF1-203ENST00000398137 AIMP2Q13155 320 aaKnown RBP23.78■■□□□ 1.4
U2AF1-203ENST00000398137 CRB2Q5IJ48 1285 aa23.78■■□□□ 1.4
U2AF1-203ENST00000398137 ANKRD9Q96BM1 317 aaPredicted RBP23.78■■□□□ 1.4
U2AF1-203ENST00000398137 HEY2Q9UBP5 337 aa23.78■■□□□ 1.4
U2AF1-203ENST00000398137 LOC102723996A0A087X1L8 192 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 TCRBV16S1A1N1A0A5B0 115 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 ZNF195O14628 629 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 PCDH17O14917 1159 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 VPS4BO75351 444 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 PRR35P0CG20 571 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 COX6A1P12074 109 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 BCKDHAP12694 445 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 MAPK1P28482 360 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 EPHA3P29320 983 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 PPP2R1BP30154 601 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 OR4D2P58180 307 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 FOLH1Q04609 750 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 STX4Q12846 297 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 SLC9B1Q4ZJI4 515 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 SFT2D3Q587I9 215 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 CPEB2Q7Z5Q1 589 aaKnown RBP23.77■■□□□ 1.4
U2AF1-203ENST00000398137 CLHC1Q8NHS4 586 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 TANKQ92844 425 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 TSSK3Q96PN8 268 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 SLAMF7Q9NQ25 335 aa23.77■■□□□ 1.4
U2AF1-203ENST00000398137 C1orf226A1L170 272 aa23.76■■□□□ 1.39
U2AF1-203ENST00000398137 DIAPH2O60879 1101 aa23.76■■□□□ 1.39
U2AF1-203ENST00000398137 SEC24DO94855 1032 aaPredicted RBP23.76■■□□□ 1.39
U2AF1-203ENST00000398137 GSTM5P46439 218 aa23.76■■□□□ 1.39
U2AF1-203ENST00000398137 IL23RQ5VWK5 629 aa23.76■■□□□ 1.39
U2AF1-203ENST00000398137 TMEM132CQ8N3T6 1108 aa23.76■■□□□ 1.39
U2AF1-203ENST00000398137 LIX1Q8N485 282 aa23.76■■□□□ 1.39
U2AF1-203ENST00000398137 DNAJB14Q8TBM8 379 aa23.76■■□□□ 1.39
U2AF1-203ENST00000398137 EGLN2Q96KS0 407 aa23.76■■□□□ 1.39
U2AF1-203ENST00000398137 CCDC134Q9H6E4 229 aa23.76■■□□□ 1.39
U2AF1-203ENST00000398137 BAIAP2L1Q9UHR4 511 aa23.76■■□□□ 1.39
U2AF1-203ENST00000398137 VPS4AQ9UN37 437 aa23.76■■□□□ 1.39
U2AF1-203ENST00000398137 B3GNT3Q9Y2A9 372 aa23.76■■□□□ 1.39
U2AF1-203ENST00000398137 PRRC2CQ9Y520 2896 aaKnown RBP23.76■■□□□ 1.39
U2AF1-203ENST00000398137 IGHV1-45A0A0A0MS14 117 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms