RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 XKP51811 444 aa25.86■■□□□ 1.73
CPNE1-203ENST00000397442 DSG2Q14126 1118 aa25.86■■□□□ 1.73
CPNE1-203ENST00000397442 IL11RAQ14626 422 aa25.86■■□□□ 1.73
CPNE1-203ENST00000397442 NET1Q7Z628 596 aaPredicted RBP25.86■■□□□ 1.73
CPNE1-203ENST00000397442 BPHLQ86WA6 291 aaPredicted RBP25.86■■□□□ 1.73
CPNE1-203ENST00000397442 PPP1R3BQ86XI6 285 aa25.86■■□□□ 1.73
CPNE1-203ENST00000397442 RNF31Q96EP0 1072 aa25.86■■□□□ 1.73
CPNE1-203ENST00000397442 ZNF583Q96ND8 569 aa25.86■■□□□ 1.73
CPNE1-203ENST00000397442 SLC35A5Q9BS91 424 aa25.86■■□□□ 1.73
CPNE1-203ENST00000397442 GIMAP4Q9NUV9 329 aa25.86■■□□□ 1.73
CPNE1-203ENST00000397442 SUCOQ9UBS9 1254 aaKnown RBP25.86■■□□□ 1.73
CPNE1-203ENST00000397442 USP22Q9UPT9 525 aa25.86■■□□□ 1.73
CPNE1-203ENST00000397442 SCRG1O75711 98 aa25.85■■□□□ 1.73
CPNE1-203ENST00000397442 PTGER1P34995 402 aa25.85■■□□□ 1.73
CPNE1-203ENST00000397442 CLDN6P56747 220 aa25.85■■□□□ 1.73
CPNE1-203ENST00000397442 ID2Q02363 134 aa25.85■■□□□ 1.73
CPNE1-203ENST00000397442 C1orf189Q5VU69 101 aa25.85■■□□□ 1.73
CPNE1-203ENST00000397442 TMEM126BQ8IUX1 230 aa25.85■■□□□ 1.73
CPNE1-203ENST00000397442 ZFP28Q8NHY6 868 aa25.85■■□□□ 1.73
CPNE1-203ENST00000397442 MAP4K5Q9Y4K4 846 aa25.85■■□□□ 1.73
CPNE1-203ENST00000397442 PCDHB3Q9Y5E6 796 aa25.85■■□□□ 1.73
CPNE1-203ENST00000397442 ZFHX2Q9C0A1 2572 aaPredicted RBP25.85■■□□□ 1.73
CPNE1-203ENST00000397442 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.84■■□□□ 1.73
CPNE1-203ENST00000397442 CIB2O75838 187 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 GPR75O95800 540 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 GPX2P18283 190 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 MPIP34949 423 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 XCR1P46094 333 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 GZMMP51124 257 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 MC2RQ01718 297 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 ERV3-1Q14264 604 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 ASCL5Q7RTU5 278 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 SAMD14Q8IZD0 417 aaPredicted RBP25.84■■□□□ 1.73
CPNE1-203ENST00000397442 TRIML2Q8N7C3 387 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 OR10A6Q8NH74 314 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 OR5AK3PQ8NH89 298 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 TBC1D20Q96BZ9 403 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 CTRCQ99895 268 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 ECSITQ9BQ95 431 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 EPS8L2Q9H6S3 715 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 ZNF304Q9HCX3 659 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 GPATCH2Q9NW75 528 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 ACSL6Q9UKU0 697 aa25.84■■□□□ 1.73
CPNE1-203ENST00000397442 ACOT8O14734 319 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 CPMP14384 443 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 UQCRC2P22695 453 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 MVDP53602 400 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 TRIM25Q14258 630 aaKnown RBP25.83■■□□□ 1.73
CPNE1-203ENST00000397442 KPNB1Q14974 876 aaKnown RBP25.83■■□□□ 1.73
CPNE1-203ENST00000397442 C1orf146Q5VVC0 180 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 MED25Q71SY5 747 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 CALHM3Q86XJ0 350 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 ZNF595Q8IYB9 648 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 LRRC25Q8N386 305 aaPredicted RBP25.83■■□□□ 1.73
CPNE1-203ENST00000397442 PCDHAC1Q9H158 963 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 PIF1Q9H611 641 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 FBXO8Q9NRD0 319 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 CLDN16Q9Y5I7 305 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 SNX8Q9Y5X2 465 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 BLACEA4D250 179 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 B4GALT2O60909 372 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 JRKO75564 520 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 ISXQ2M1V0 245 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 IFNEQ86WN2 208 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 DEFB124Q8NES8 71 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 PNPT1Q8TCS8 783 aaKnown RBP25.83■■□□□ 1.73
CPNE1-203ENST00000397442 ASB9Q96DX5 294 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 DPH2Q9BQC3 489 aaPredicted RBP25.83■■□□□ 1.73
CPNE1-203ENST00000397442 TMEM121BQ9BXQ6 578 aaPredicted RBP25.83■■□□□ 1.73
CPNE1-203ENST00000397442 LANCL2Q9NS86 450 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 SLC22A11Q9NSA0 550 aa25.83■■□□□ 1.73
CPNE1-203ENST00000397442 MRPS33Q9Y291 106 aaKnown RBP25.83■■□□□ 1.73
CPNE1-203ENST00000397442 EVPLLA8MZ36 301 aa25.82■■□□□ 1.72
CPNE1-203ENST00000397442 TGFBR3LH3BV60 316 aa25.82■■□□□ 1.72
CPNE1-203ENST00000397442 POLR1CO15160 346 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-203ENST00000397442 CDC123O75794 336 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-203ENST00000397442 NTRK1P04629 796 aa25.82■■□□□ 1.72
CPNE1-203ENST00000397442 FHP07954 510 aa25.82■■□□□ 1.72
CPNE1-203ENST00000397442 FBLP22087 321 aaKnown RBP25.82■■□□□ 1.72
CPNE1-203ENST00000397442 SOAT1P35610 550 aa25.82■■□□□ 1.72
CPNE1-203ENST00000397442 LIMK1P53667 647 aa25.82■■□□□ 1.72
CPNE1-203ENST00000397442 LTB4RQ15722 352 aa25.82■■□□□ 1.72
CPNE1-203ENST00000397442 FXNQ16595 210 aa25.82■■□□□ 1.72
CPNE1-203ENST00000397442 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.82■■□□□ 1.72
CPNE1-203ENST00000397442 SLCO6A1Q86UG4 719 aa25.82■■□□□ 1.72
CPNE1-203ENST00000397442 OR9A2Q8NGT5 310 aa25.82■■□□□ 1.72
CPNE1-203ENST00000397442 COL26A1Q96A83 441 aa25.82■■□□□ 1.72
CPNE1-203ENST00000397442 KCTD14Q9BQ13 255 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-203ENST00000397442 AP3M1Q9Y2T2 418 aa25.82■■□□□ 1.72
CPNE1-203ENST00000397442 RIF1Q5UIP0 2472 aaKnown RBP25.82■■□□□ 1.72
CPNE1-203ENST00000397442 MYOCOSA0A1B0GUC4 107 aa25.81■■□□□ 1.72
CPNE1-203ENST00000397442 DNAJA2O60884 412 aa25.81■■□□□ 1.72
CPNE1-203ENST00000397442 CTNSO60931 367 aa25.81■■□□□ 1.72
CPNE1-203ENST00000397442 PORP16435 677 aaPredicted RBP25.81■■□□□ 1.72
CPNE1-203ENST00000397442 PPIBP23284 216 aaKnown RBP25.81■■□□□ 1.72
CPNE1-203ENST00000397442 OR4D2P58180 307 aa25.81■■□□□ 1.72
CPNE1-203ENST00000397442 ACTR3P61158 418 aa25.81■■□□□ 1.72
CPNE1-203ENST00000397442 BTG2P78543 158 aa25.81■■□□□ 1.72
CPNE1-203ENST00000397442 ZNF385CQ66K41 422 aaPredicted RBP25.81■■□□□ 1.72
CPNE1-203ENST00000397442 CYB5D1Q6P9G0 228 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms