RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 LINC01555Q8NAE3 123 aa14.43□□□□□ -0.1
MCF2L-205ENST00000397017 WDR20Q8TBZ3 569 aa14.43□□□□□ -0.1
MCF2L-205ENST00000397017 TESCQ96BS2 214 aa14.43□□□□□ -0.1
MCF2L-205ENST00000397017 VMP1Q96GC9 406 aa14.43□□□□□ -0.1
MCF2L-205ENST00000397017 PTCHD1Q96NR3 888 aa14.43□□□□□ -0.1
MCF2L-205ENST00000397017 ALPK1Q96QP1 1244 aa14.43□□□□□ -0.1
MCF2L-205ENST00000397017 DOHHQ9BU89 302 aa14.43□□□□□ -0.1
MCF2L-205ENST00000397017 MS4A8Q9BY19 250 aa14.43□□□□□ -0.1
MCF2L-205ENST00000397017 POLR2J3Q9H1A7 115 aaKnown RBP14.43□□□□□ -0.1
MCF2L-205ENST00000397017 ICKQ9UPZ9 632 aa14.43□□□□□ -0.1
MCF2L-205ENST00000397017 FAM227AF5H4B4 570 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 H0YGG7 62 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 ALPPP05187 535 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 PROS1P07225 676 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 UGT2B7P16662 529 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 ARF3P61204 181 aaPredicted RBP14.42□□□□□ -0.1
MCF2L-205ENST00000397017 VLDLRP98155 873 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 ARHGAP19Q14CB8 494 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 LARS2Q15031 903 aaKnown RBP14.42□□□□□ -0.1
MCF2L-205ENST00000397017 SNAPC1Q16533 368 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 ZNF630Q2M218 657 aaPredicted RBP14.42□□□□□ -0.1
MCF2L-205ENST00000397017 TMEM236Q5W0B7 351 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 NRROSQ86YC3 692 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 TMEM102Q8N9M5 508 aaPredicted RBP14.42□□□□□ -0.1
MCF2L-205ENST00000397017 OR2L5Q8NG80 312 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 UCN3Q969E3 161 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 SLCO4A1Q96BD0 722 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 CXorf21Q9HAI6 301 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 ZNF217O75362 1048 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 PAPLNO95428 1278 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 FURINP09958 794 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 DCTP40126 519 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 MTAPQ13126 283 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 GNA13Q14344 377 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 EXOC3L2Q2M3D2 409 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 PEX5LQ8IYB4 626 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 CLIP4Q8N3C7 705 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 SMRP1Q8NCR6 262 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 CHTF18Q8WVB6 975 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 TPK1Q9H3S4 243 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 DCAF13Q9NV06 445 aaKnown RBP14.42□□□□□ -0.1
MCF2L-205ENST00000397017 GTF2A1LQ9UNN4 478 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 COLQQ9Y215 455 aaPredicted RBP14.42□□□□□ -0.1
MCF2L-205ENST00000397017 GABRA3P34903 492 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 EXOSC7Q15024 291 aaKnown RBP14.42□□□□□ -0.1
MCF2L-205ENST00000397017 TBPL2Q6SJ96 375 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 SLC34A3Q8N130 599 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 HORMAD2Q8N7B1 307 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 OR2A1Q8NGT9 310 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 GEMIN6Q8WXD5 167 aaKnown RBP14.42□□□□□ -0.1
MCF2L-205ENST00000397017 GPATCH1Q9BRR8 931 aaKnown RBP14.42□□□□□ -0.1
MCF2L-205ENST00000397017 FBRSQ9HAH7 460 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 AGPAT4Q9NRZ5 378 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 KCMF1Q9P0J7 381 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 NAALAD2Q9Y3Q0 740 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 CLCA3PQ9Y6N3 262 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 COMMD3-BMI1R4GMX3 469 aa14.42□□□□□ -0.1
MCF2L-205ENST00000397017 SCN2BO60939 215 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 FUCA1P04066 466 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 FPR1P21462 350 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 RPL4P36578 427 aaKnown RBP14.41□□□□□ -0.1
MCF2L-205ENST00000397017 GPR19Q15760 415 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 ADRM1Q16186 407 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 RFX4Q33E94 735 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 SVOPLQ8N434 492 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 TP53I13Q8NBR0 393 aaPredicted RBP14.41□□□□□ -0.1
MCF2L-205ENST00000397017 OR52N2Q8NGI0 321 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 TMIGD2Q96BF3 282 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 SH3YL1Q96HL8 342 aaPredicted RBP14.41□□□□□ -0.1
MCF2L-205ENST00000397017 NODALQ96S42 347 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 TEX101Q9BY14 249 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 MARCH7Q9H992 704 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 CHD7Q9P2D1 2997 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 A0A1B0GVT2 93 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 A0A1W2PQF6 199 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 TSPAN11A1L157 253 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 C1orf226A1L170 272 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 TOR1BO14657 336 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 AIFM1O95831 613 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 CBLP22681 906 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 HNRNPKP61978 463 aaKnown RBP eCLIP14.41□□□□□ -0.18e-7■■■■□ 19.6
MCF2L-205ENST00000397017 RPS15AP62244 130 aaKnown RBP14.41□□□□□ -0.1
MCF2L-205ENST00000397017 MAP3K3Q99759 626 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 TBC1D17Q9HA65 648 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 PELI2Q9HAT8 420 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 NDUFA13Q9P0J0 144 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 SCN2AQ99250 2005 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 CHD5Q8TDI0 1954 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 LOC105369274A0A096LPK9 316 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 LOC102723532A0A0G2JNH3 316 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 GRXCR2A6NFK2 248 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 KHNYNO15037 678 aaKnown RBP14.41□□□□□ -0.1
MCF2L-205ENST00000397017 REM1O75628 298 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 KCNK5O95279 499 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 BCL10O95999 233 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 ACADLP28330 430 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 TPP2P29144 1249 aaPredicted RBP14.41□□□□□ -0.1
MCF2L-205ENST00000397017 KIAA0040Q15053 153 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 TOMM20Q15388 145 aa14.41□□□□□ -0.1
MCF2L-205ENST00000397017 CRB2Q5IJ48 1285 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms