RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 PRAMEF10O60809 474 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 PROS1P07225 676 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 FESP07332 822 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 GLDCP23378 1020 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 EIF2DP41214 584 aaKnown RBP14.96□□□□□ -0.01
GNE-202ENST00000396594 SLC6A9P48067 706 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 DCDC1P59894 354 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 TMEM198Q66K66 360 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 RTL6Q6ICC9 239 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 PAQR7Q86WK9 346 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 RHBDF1Q96CC6 855 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 PINK1Q9BXM7 581 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 NKX2-4Q9H2Z4 354 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 C12orf65Q9H3J6 166 aaKnown RBP14.96□□□□□ -0.01
GNE-202ENST00000396594 NELFAQ9H3P2 528 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 SNTG1Q9NSN8 517 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 EURLQ9NYK6 297 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 RNF6Q9Y252 685 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 ANKRD36CQ5JPF3 1778 aa14.96□□□□□ -0.01
GNE-202ENST00000396594 H7BY64 318 aa14.96□□□□□ -0.02
GNE-202ENST00000396594 HLA-EP13747 358 aa14.96□□□□□ -0.02
GNE-202ENST00000396594 YAP1P46937 504 aaKnown RBP14.96□□□□□ -0.02
GNE-202ENST00000396594 MOGSQ13724 837 aa14.96□□□□□ -0.02
GNE-202ENST00000396594 FGL2Q14314 439 aa14.96□□□□□ -0.02
GNE-202ENST00000396594 BORAQ6PGQ7 559 aa14.96□□□□□ -0.02
GNE-202ENST00000396594 PRAP1Q96NZ9 151 aa14.96□□□□□ -0.02
GNE-202ENST00000396594 FCRL3Q96P31 734 aaPredicted RBP14.96□□□□□ -0.02
GNE-202ENST00000396594 DPH7Q9BTV6 452 aa14.96□□□□□ -0.02
GNE-202ENST00000396594 OR51I1Q9H343 314 aa14.96□□□□□ -0.02
GNE-202ENST00000396594 MYH7P12883 1935 aa14.96□□□□□ -0.02
GNE-202ENST00000396594 H3BNC9 293 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 ARNTLO00327 626 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 P04436 131 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 AHRP35869 848 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 TPK1Q9H3S4 243 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 POT1Q9NUX5 634 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 NRAPQ86VF7 1730 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 NDUFV2P19404 249 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 GGT1P19440 569 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 MSX2P35548 267 aaPredicted RBP14.95□□□□□ -0.02
GNE-202ENST00000396594 ZNF404Q494X3 552 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 HS3ST5Q8IZT8 346 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 MFSD2AQ8NA29 543 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 NINJ1Q92982 152 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 MS4A4AQ96JQ5 239 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 TBCCD1Q9NVR7 557 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 EIF3KQ9UBQ5 218 aaKnown RBP14.95□□□□□ -0.02
GNE-202ENST00000396594 GHRLQ9UBU3 117 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 TRAPPC13A5PLN9 417 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 EFCAB7A8K855 629 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 OR2T1O43869 369 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 ZBTB11O95625 1053 aaPredicted RBP14.95□□□□□ -0.02
GNE-202ENST00000396594 POU2F1P14859 743 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 SYCE2Q6PIF2 218 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 ZNF782Q6ZMW2 699 aaPredicted RBP14.95□□□□□ -0.02
GNE-202ENST00000396594 MRPL41Q8IXM3 137 aaKnown RBP14.95□□□□□ -0.02
GNE-202ENST00000396594 SMPDL3BQ92485 455 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 DTD2Q96FN9 168 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 MROQ9BYG7 248 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 INPP5EQ9NRR6 644 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 COPZ2Q9P299 210 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 PCGF2P35227 344 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 HERV-K104P61576 105 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.95□□□□□ -0.02
GNE-202ENST00000396594 OR2L2Q8NH16 312 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 GPR174Q9BXC1 333 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 PCDHAC1Q9H158 963 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 CENPMQ9NSP4 180 aa14.95□□□□□ -0.02
GNE-202ENST00000396594 C2orf78A6NCI8 922 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 CPSF4LA6NMK7 179 aaKnown RBP14.94□□□□□ -0.02
GNE-202ENST00000396594 E7EQ34 232 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 ADAMTS4O75173 837 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 ICAM2P13598 275 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 VEGFBP49765 207 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 GNG2P59768 71 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 PUDPQ08623 228 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 RAB39AQ14964 217 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 GXYLT1Q4G148 440 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 MARVELD2Q8N4S9 558 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 OR5AK3PQ8NH89 298 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 HSPA12BQ96MM6 686 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 OR8D2Q9GZM6 311 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 TTC34A8MYJ7 566 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 TSC22D1Q15714 1073 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 GPRIN1Q7Z2K8 1008 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 ZNF101Q8IZC7 436 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 ARHGAP9Q9BRR9 750 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 APOOQ9BUR5 198 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 LOC285095A0A1B0GVY8 99 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 FAM72CH0Y354 149 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 PDLIM1O00151 329 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 GABRA3P34903 492 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 CRISP1P54107 249 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 CTBP2P56545 445 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 HHEXQ03014 270 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 DSC1Q08554 894 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 FAM72AQ5TYM5 149 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 PRAMEF17Q5VTA0 474 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 FAM72DQ6L9T8 149 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 PGM2L1Q6PCE3 622 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms